contig_metadata
7 rows where bioproject = "PRJNA929952", tax_kingdom = "Pseudomonadati" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1254788 | 1254788 | PRJNA929952_P_NODE_6021_length_504_cov_29.482105_g4910_i0 | PRJNA929952 | 6021 | 504 | 29.482105 | 148.5898092 | Nitrospira | 1234 | Bacteria | Bacteria | 597 | 5.0499999999999983e-166 | NTclustered | gi|2290907019|gb|CP060499.1| | 70125 | g4910 | i0 | 95.238 | 74.4464285714286 | 378 | 16 | 75 | 2 | 1 | 377 | 2686740 | 2687116 | MAG: Nitrospira sp. isolate DH1 chromosome, complete genome | blastn | 37521 | 597 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 10183466 | 10183466 | PRJNA929952_P_NODE_10628_length_349_cov_23.296875_g9339_i0 | PRJNA929952 | 10628 | 349 | 23.296875 | 81.30609375 | Nitrospira | 1234 | Bacteria | Bacteria | 263 | 1.4e-65 | NTclustered | gi|1167499077|emb|LT828648.1| | 1325564 | g9339 | i0 | 88.94 | 143.977077363897 | 217 | 19 | 62 | 5 | 135 | 349 | 2390072 | 2390285 | Nitrospira japonica isolate Genome sequencing of Nitrospira japonica strain NJ11 genome assembly, chromosome: I | blastn | 50248 | 263 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira japonica | ||
| 11112824 | 11112824 | PRJNA929952_P_NODE_9509_length_380_cov_20.997151_g8234_i0 | PRJNA929952 | 9509 | 380 | 20.997151 | 79.7891738 | Candidatus Nitrospira kreftii | 2652173 | Bacteria | Bacteria | 453 | 8.500000000000001e-123 | NTclustered | gi|1884724763|gb|CP047423.1| | 2652173 | g8234 | i0 | 96.043 | 125.663157894737 | 278 | 11 | 73 | 0 | 103 | 380 | 2707520 | 2707797 | Candidatus Nitrospira kreftii isolate comreactor17 chromosome, complete genome | blastn | 47752 | 453 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira kreftii | ||
| 13662797 | 13662797 | PRJNA929952_P_NODE_23351_length_164_cov_5.200000_g22057_i0 | PRJNA929952 | 23351 | 164 | 5.2 | 8.528 | Nitrospira sp. KM1 | 1936990 | Bacteria | Bacteria | 292 | 7.41e-75 | NTclustered | gi|1808878785|dbj|AP022671.1| | 1936990 | g22057 | i0 | 98.78 | 23.0182926829268 | 164 | 2 | 100 | 0 | 1 | 164 | 4207793 | 4207956 | Nitrospira sp. KM1 DNA, complete genome | blastn | 3775 | 292 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. KM1 | ||
| 16557323 | 16557323 | PRJNA929952_P_NODE_21853_length_182_cov_22.594771_g20559_i0 | PRJNA929952 | 21853 | 182 | 22.594771 | 41.12248322 | Nitrospira | 1234 | Bacteria | Bacteria | 213 | 6.71e-51 | NTclustered | gi|2863129529|dbj|AP038806.1| | 70125 | g20559 | i0 | 88.636 | 311.104395604396 | 176 | 18 | 97 | 2 | 7 | 182 | 3062830 | 3062657 | MAG: Nitrospira sp. NFB02 DNA, complete genome | blastn | 56621 | 213 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 21311234 | 21311234 | PRJNA929952_P_NODE_16317_length_251_cov_22.986486_g15023_i0 | PRJNA929952 | 16317 | 251 | 22.986486 | 57.69607986 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 289 | 1.59e-73 | NTclustered | gi|2290907019|gb|CP060499.1| | 70125 | g15023 | i0 | 96.067 | 234.637450199203 | 178 | 6 | 71 | 1 | 74 | 251 | 2684648 | 2684472 | MAG: Nitrospira sp. isolate DH1 chromosome, complete genome | blastn | 58894 | 289 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 21311264 | 21311264 | PRJNA929952_P_NODE_4997_length_558_cov_31.737240_g3971_i0 | PRJNA929952 | 4997 | 558 | 31.73724 | 177.0937992 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 937 | 0 | NTclustered | gi|2511640680|gb|CP126121.1| | 70125 | g3971 | i0 | 96.953 | 80.2562724014337 | 558 | 17 | 100 | 0 | 1 | 558 | 201925 | 201368 | MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome | blastn | 44783 | 937 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;