contig_metadata
17 rows where bioproject = "PRJNA929952", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2184533 | 2184533 | PRJNA929952_P_NODE_622_length_1317_cov_74.841615_g424_i0 | PRJNA929952 | 622 | 1317 | 74.841615 | 985.66406955 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 1402 | 0 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g424 | i0 | 85.86 | 193.273348519362 | 1372 | 133 | 100 | 28 | 1 | 1317 | 3446654 | 3448019 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 254541 | 1402 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 3460034 | 3460034 | PRJNA929952_P_NODE_1763_length_883_cov_10.576112_g253_i2 | PRJNA929952 | 1763 | 883 | 10.576112 | 93.38706896 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 135 | 8.6e-27 | NTclustered | gi|578016248|gb|CP002190.1| | 765869 | g253 | i2 | 78.341 | 10.2049830124575 | 217 | 41 | 24 | 6 | 49 | 262 | 609805 | 609592 | Bdellovibrio bacteriovorus W, complete genome | blastn | 9011 | 135 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 3806823 | 3806823 | PRJNA929952_P_NODE_15103_length_265_cov_6.953390_g13809_i0 | PRJNA929952 | 15103 | 265 | 6.95339 | 18.4264835 | Bdellovibrio | 958 | Bacteria | Bacteria | 412 | 9.64e-111 | NTclustered | gi|2801803968|gb|CP169237.1| | 959 | g13809 | i0 | 94.757 | 145.958490566038 | 267 | 11 | 100 | 2 | 1 | 265 | 945277 | 945012 | Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome | blastn | 38679 | 412 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 10183479 | 10183479 | PRJNA929952_P_NODE_16988_length_244_cov_433.288372_g15694_i0 | PRJNA929952 | 16988 | 244 | 433.288372 | 1057.22362768 | Bdellovibrio | 958 | Bacteria | Bacteria | 353 | 5.389999999999998e-93 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g15694 | i0 | 93.333 | 262.180327868852 | 240 | 15 | 98 | 1 | 5 | 244 | 1606714 | 1606952 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 63972 | 353 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 10183481 | 10183481 | PRJNA929952_P_NODE_17568_length_238_cov_8.650718_g16274_i0 | PRJNA929952 | 17568 | 238 | 8.650718 | 20.58870884 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 270 | 5.42e-68 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g16274 | i0 | 87.342 | 87.0210084033613 | 237 | 28 | 99 | 2 | 3 | 238 | 1512 | 1277 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 20711 | 270 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 11458523 | 11458523 | PRJNA929952_P_NODE_10669_length_348_cov_7.501567_g9380_i0 | PRJNA929952 | 10669 | 348 | 7.501567 | 26.10545316 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 503 | 7.57e-138 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g9380 | i0 | 92.614 | 93.4080459770115 | 352 | 22 | 100 | 4 | 1 | 348 | 1163 | 1514 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 32506 | 503 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 12734223 | 12734223 | PRJNA929952_P_NODE_190_length_1921_cov_54.182347_g122_i0 | PRJNA929952 | 190 | 1921 | 54.182347 | 1040.84288587 | Bdellovibrio | 958 | Bacteria | Bacteria | 1435 | 0 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g122 | i0 | 84.015 | 139.377407600208 | 1564 | 176 | 78 | 39 | 419 | 1921 | 1676689 | 1678239 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 267744 | 1448 | 0.991022099447514 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 12734237 | 12734237 | PRJNA929952_P_NODE_5230_length_544_cov_14.592233_g4180_i0 | PRJNA929952 | 5230 | 544 | 14.592233 | 79.38174752 | Bdellovibrio | 958 | Bacteria | Bacteria | 889 | 0 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g4180 | i0 | 96.147 | 92.3345588235294 | 545 | 20 | 100 | 1 | 1 | 544 | 784366 | 784910 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 50230 | 889 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 13662787 | 13662787 | PRJNA929952_P_NODE_191_length_1919_cov_52.726984_g123_i0 | PRJNA929952 | 191 | 1919 | 52.726984 | 1011.83082296 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 1467 | 0 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g123 | i0 | 84.19 | 139.108910891089 | 1575 | 182 | 79 | 34 | 403 | 1919 | 3448219 | 3446654 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 266950 | 1467 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 17487446 | 17487446 | PRJNA929952_P_NODE_494_length_1420_cov_51.859813_g331_i0 | PRJNA929952 | 494 | 1420 | 51.859813 | 736.4093446 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 894 | 0 | NTclustered | gi|2893356071|emb|OZ220494.1| | 2053517 | g331 | i0 | 78.854 | 229.026056338028 | 1466 | 206 | 97 | 67 | 40 | 1420 | 966956 | 965510 | MAG: Bdellovibrionales bacterium isolate 95f108ca-4012-4f55-a596-77f5f94b2342 genome assembly, chromosome: 1 | blastn | 325217 | 894 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 18760802 | 18760802 | PRJNA929952_P_NODE_7615_length_439_cov_6.836585_g1671_i1 | PRJNA929952 | 7615 | 439 | 6.836585 | 30.01260815 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 381 | 4.759999999999999e-101 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g1671 | i1 | 83.135 | 165.305239179954 | 421 | 67 | 95 | 3 | 1 | 418 | 3448494 | 3448075 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 72569 | 381 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 20035749 | 20035749 | PRJNA929952_P_NODE_12056_length_317_cov_4.065972_g10763_i0 | PRJNA929952 | 12056 | 317 | 4.065972 | 12.88913124 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 492 | 1.48e-134 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g10763 | i0 | 94.637 | 44.7728706624606 | 317 | 17 | 100 | 0 | 1 | 317 | 1292356 | 1292672 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 14193 | 492 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 20381134 | 20381134 | PRJNA929952_P_NODE_12356_length_311_cov_4.152482_g11063_i0 | PRJNA929952 | 12356 | 311 | 4.152482 | 12.91421902 | Peredibacter | 263370 | Bacteria | Bacteria | 553 | 6.539999999999998e-153 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g11063 | i0 | 98.714 | 252.781350482315 | 311 | 4 | 100 | 0 | 1 | 311 | 511507 | 511197 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 78615 | 553 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 22932647 | 22932647 | PRJNA929952_P_NODE_7398_length_446_cov_37.014388_g6186_i0 | PRJNA929952 | 7398 | 446 | 37.014388 | 165.08417048 | Bdellovibrio | 958 | Bacteria | Bacteria | 652 | 0 | NTclustered | gi|2800917394|gb|CP168972.1| | 959 | g6186 | i0 | 93.258 | 191.784753363229 | 445 | 27 | 99 | 3 | 2 | 445 | 747621 | 748063 | Bdellovibrio bacteriovorus strain Bd19 chromosome, complete genome | blastn | 85536 | 652 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 23861472 | 23861472 | PRJNA929952_P_NODE_2939_length_717_cov_44.811047_g2193_i0 | PRJNA929952 | 2939 | 717 | 44.811047 | 321.29520699 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 1153 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g2193 | i0 | 96.051 | 131.507670850767 | 709 | 26 | 99 | 1 | 11 | 717 | 512512 | 511804 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 94291 | 1153 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 24206406 | 24206406 | PRJNA929952_P_NODE_6339_length_488_cov_62.607843_g5203_i0 | PRJNA929952 | 6339 | 488 | 62.607843 | 305.52627384 | Bdellovibrio | 958 | Bacteria | Bacteria | 261 | 7.26e-65 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g5203 | i0 | 77.273 | 101.762295081967 | 506 | 75 | 97 | 21 | 1 | 472 | 1676863 | 1676364 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 49660 | 261 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 25135326 | 25135326 | PRJNA929952_P_NODE_6340_length_488_cov_48.662309_g5204_i0 | PRJNA929952 | 6340 | 488 | 48.662309 | 237.47206792 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 261 | 7.26e-65 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g5204 | i0 | 77.439 | 100.559426229508 | 492 | 75 | 95 | 17 | 27 | 488 | 665461 | 665946 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 49073 | 261 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;