RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA929952", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA929952 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14008809 14008809 PRJNA929952_P_NODE_3711_length_647_cov_85.077670_g2841_i0 PRJNA929952 3711 647 85.07767 550.4525249 Amphidiscosida 269027 Porifera other_Eukaryota 145 1.03e-29   NTclustered gi|1336429313|gb|MF684000.1| 2079124 g2841 i0 82.249 20.1761978361669 169 29 26 1 398 565 672 504 Hyalonema agassizi voucher SMF12069 28S ribosomal RNA gene, partial sequence blastn 13054 145 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Amphidiscosida Hyalonematidae Hyalonema Hyalonema agassizi
15282737 15282737 PRJNA929952_P_NODE_3712_length_647_cov_32.661812_g2842_i0 PRJNA929952 3712 647 32.661812 211.32192364 Amphidiscosida 269027 Porifera other_Eukaryota 145 1.03e-29   NTclustered gi|1336429313|gb|MF684000.1| 2079124 g2842 i0 82.249 20.1761978361669 169 29 26 1 83 250 504 672 Hyalonema agassizi voucher SMF12069 28S ribosomal RNA gene, partial sequence blastn 13054 145 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Amphidiscosida Hyalonematidae Hyalonema Hyalonema agassizi
17832382 17832382 PRJNA929952_P_NODE_9454_length_382_cov_4.682720_g8179_i0 PRJNA929952 9454 382 4.68272 17.8879904 Mycale 86015 Porifera other_Eukaryota 110 2.13e-19   NTclustered gi|2304601810|gb|OP458345.1| 2978134 g8179 i0 77.487 44.979057591623 191 38 49 4 36 224 999 812 Mycale sp. l CD-2022 isolate IML208 large subunit ribosomal RNA gene, partial sequence blastn 17182 110 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Poecilosclerida Mycalidae Mycale Mycale sp. l CD-2022

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;