contig_metadata
17 rows where bioproject = "PRJNA929952", tax_kingdom = "Bacillati" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1254794 | 1254794 | PRJNA929952_P_NODE_8541_length_408_cov_2.693931_g7281_i0 | PRJNA929952 | 8541 | 408 | 2.693931 | 10.99123848 | Exiguobacterium | 33986 | Bacteria | Bacteria | 309 | 2.11e-79 | NTclustered | gi|2851161950|gb|CP085018.1| | 169177 | g7281 | i0 | 90.598 | 225.014705882353 | 234 | 21 | 57 | 1 | 1 | 233 | 13911 | 13678 | Exiguobacterium undae strain SLM-182 chromosome, complete genome | blastn | 91806 | 309 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium undae | |||
| 3806830 | 3806830 | PRJNA929952_P_NODE_20783_length_197_cov_780.755952_g19489_i0 | PRJNA929952 | 20783 | 197 | 780.755952 | 1538.08922544 | Staphylococcus | 1279 | Bacteria | Bacteria | 285 | 1.55e-72 | NTclustered | gi|1403776180|emb|LS483311.1| | 1280 | g19489 | i0 | 92.893 | 531.238578680203 | 197 | 13 | 100 | 1 | 1 | 197 | 564594 | 564789 | Staphylococcus aureus strain NCTC6136 genome assembly, chromosome: 1 | blastn | 104654 | 287 | 0.993031358885017 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 8907601 | 8907601 | PRJNA929952_P_NODE_20607_length_200_cov_3.345029_g19313_i0 | PRJNA929952 | 20607 | 200 | 3.345029 | 6.690058 | root | 1 | Root_unresolved | Root_unresolved | 370 | 4.22e-98 | NTclustered | gi|2675654968|gb|PP338727.1| | 1579 | g19313 | i0 | 100 | 115 | 200 | 0 | 100 | 0 | 1 | 200 | 794 | 595 | Lactobacillus acidophilus strain RG-07 16S ribosomal RNA gene, partial sequence | blastn | 23000 | 370 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus acidophilus | ||
| 12388305 | 12388305 | PRJNA929952_P_NODE_15710_length_258_cov_3.000000_g14416_i0 | PRJNA929952 | 15710 | 258 | 3 | 7.74 | Clostridium culturomicium | 1499683 | Bacteria | Bacteria | 104 | 6.39e-18 | NTclustered | gi|2831321202|gb|CP171113.1| | 1499683 | g14416 | i0 | 90 | 132.06976744186 | 80 | 8 | 31 | 0 | 179 | 258 | 11431 | 11352 | Clostridium culturomicium strain WGS1527 chromosome, complete genome | blastn | 34074 | 104 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium culturomicium | ||
| 12734238 | 12734238 | PRJNA929952_P_NODE_7050_length_460_cov_4.638051_g5857_i0 | PRJNA929952 | 7050 | 460 | 4.638051 | 21.3350346 | Lactobacillus | 1578 | Bacteria | Bacteria | 795 | 0 | NTclustered | gi|2096299657|gb|CP083392.1| | 47770 | g5857 | i0 | 97.826 | 422.039130434783 | 460 | 10 | 100 | 0 | 1 | 460 | 90717 | 90258 | Lactobacillus crispatus strain Lc1226 chromosome, complete genome | blastn | 194138 | 795 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 14008786 | 14008786 | PRJNA929952_P_NODE_15631_length_259_cov_3.182609_g14337_i0 | PRJNA929952 | 15631 | 259 | 3.182609 | 8.24295731 | Lactobacillus | 1578 | Bacteria | Bacteria | 473 | 4.25e-129 | NTclustered | gi|2913177562|gb|CP180627.1| | 47770 | g14337 | i0 | 99.614 | 384.752895752896 | 259 | 1 | 100 | 0 | 1 | 259 | 1145899 | 1146157 | Lactobacillus crispatus strain T31e chromosome, complete genome | blastn | 99651 | 473 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 15282743 | 15282743 | PRJNA929952_P_NODE_7052_length_460_cov_4.176334_g5859_i0 | PRJNA929952 | 7052 | 460 | 4.176334 | 19.2111364 | Lactobacillus | 1578 | Bacteria | Bacteria | 850 | 0 | NTclustered | gi|2096299657|gb|CP083392.1| | 47770 | g5859 | i0 | 100 | 422.039130434783 | 460 | 0 | 100 | 0 | 1 | 460 | 90258 | 90717 | Lactobacillus crispatus strain Lc1226 chromosome, complete genome | blastn | 194138 | 850 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 17487403 | 17487403 | PRJNA929952_P_NODE_10174_length_361_cov_10.924699_g8891_i0 | PRJNA929952 | 10174 | 361 | 10.924699 | 39.43816339 | Ruminiclostridium cellulolyticum | 1521 | Bacteria | Bacteria | 84.2 | 1.21e-11 | NTclustered | gi|219997787|gb|CP001348.1| | 394503 | g8891 | i0 | 86.842 | 35.5346260387812 | 76 | 9 | 21 | 1 | 167 | 241 | 4054877 | 4054952 | Ruminiclostridium cellulolyticum H10 chromosome, complete genome | blastn | 12828 | 84.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Ruminiclostridium | Ruminiclostridium cellulolyticum | ||
| 20035803 | 20035803 | PRJNA929952_P_NODE_8616_length_405_cov_11.707447_g7356_i0 | PRJNA929952 | 8616 | 405 | 11.707447 | 47.41516035 | Ruminiclostridium cellulolyticum | 1521 | Bacteria | Bacteria | 84.2 | 1.38e-11 | NTclustered | gi|219997787|gb|CP001348.1| | 394503 | g7356 | i0 | 87.5 | 0.444444444444444 | 72 | 9 | 18 | 0 | 214 | 285 | 4054881 | 4054952 | Ruminiclostridium cellulolyticum H10 chromosome, complete genome | blastn | 180 | 84.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Ruminiclostridium | Ruminiclostridium cellulolyticum | ||
| 20381146 | 20381146 | PRJNA929952_P_NODE_21436_length_188_cov_5.157233_g20142_i0 | PRJNA929952 | 21436 | 188 | 5.157233 | 9.69559804 | Bacillati | 1783272 | Bacteria | Bacteria | 237 | 4.14e-58 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g20142 | i0 | 100 | 513.63829787234 | 128 | 0 | 99 | 0 | 60 | 187 | 748549 | 748422 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 96564 | 237 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 21311257 | 21311257 | PRJNA929952_P_NODE_3157_length_697_cov_3.962575_g2366_i0 | PRJNA929952 | 3157 | 697 | 3.962575 | 27.61914775 | Streptococcus australis | 113107 | Bacteria | Bacteria | 553 | 1.5699999999999996e-152 | NTclustered | gi|1686100210|gb|MK330558.1| | 113107 | g2366 | i0 | 92.347 | 326.004304160689 | 392 | 25 | 56 | 4 | 1 | 391 | 2882 | 3269 | Streptococcus australis strain 2086_09 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 227225 | 553 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus australis | ||
| 22932629 | 22932629 | PRJNA929952_P_NODE_20078_length_209_cov_3.266667_g18784_i0 | PRJNA929952 | 20078 | 209 | 3.266667 | 6.82733403 | Streptococcus | 1301 | Bacteria | Bacteria | 261 | 2.8e-65 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g18784 | i0 | 100 | 351.421052631579 | 141 | 0 | 100 | 0 | 69 | 209 | 1571258 | 1571398 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 73447 | 261 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 22932635 | 22932635 | PRJNA929952_P_NODE_21798_length_183_cov_3.714286_g20504_i0 | PRJNA929952 | 21798 | 183 | 3.714286 | 6.79714338 | root | 1 | Root_unresolved | Root_unresolved | 339 | 1.07e-88 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g20504 | i0 | 100 | 103 | 183 | 0 | 100 | 0 | 1 | 183 | 1572698 | 1572880 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 18849 | 339 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 24206408 | 24206408 | PRJNA929952_P_NODE_7439_length_445_cov_6.072115_g6222_i0 | PRJNA929952 | 7439 | 445 | 6.072115 | 27.02091175 | Staphylococcus | 1279 | Bacteria | Bacteria | 787 | 0 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g6222 | i0 | 98.652 | 504.065168539326 | 445 | 5 | 100 | 1 | 1 | 445 | 2278389 | 2277946 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 224309 | 787 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 26961480 | 26961480 | PRJNA929952_P_NODE_2882_length_723_cov_3.785303_g2147_i0 | PRJNA929952 | 2882 | 723 | 3.785303 | 27.36774069 | Massilimicrobiota sp. An142 | 1965564 | Bacteria | Bacteria | 44.3 | 0.0168 | NR | OUQ08064.1 | 1965564 | g2147 | i0 | 47.8 | 0.190871369294606 | 46 | 24 | 19.1 | 0 | 355 | 492 | 6 | 51 | OUQ08064.1 hypothetical protein B5E87_14690 [Massilimicrobiota sp. An142] | diamond | 138 | 44.3 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Massilimicrobiota | Massilimicrobiota sp. An142 | ||
| 27277918 | 27277918 | PRJNA929952_P_NODE_21063_length_193_cov_8.341463_g19769_i0 | PRJNA929952 | 21063 | 193 | 8.341463 | 16.09902359 | Clostridiales bacterium | 1898207 | Bacteria | Bacteria | 42.7 | 0.0196 | NR | NLE68665.1 | 1898207 | g19769 | i0 | 51.4 | 0.575129533678757 | 37 | 15 | 57.5 | 1 | 130 | 20 | 97 | 130 | NLE68665.1 hypothetical protein [Clostridiales bacterium] | diamond | 111 | 42.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiales bacterium | ||||
| 31953037 | 31953037 | PRJNA929952_P_NODE_2897_length_721_cov_3.923410_g2147_i1 | PRJNA929952 | 2897 | 721 | 3.92341 | 28.2877861 | Massilimicrobiota sp. An142 | 1965564 | Bacteria | Bacteria | 44.3 | 0.0167 | NR | OUQ08064.1 | 1965564 | g2147 | i1 | 47.8 | 0.191400832177531 | 46 | 24 | 19.1 | 0 | 369 | 232 | 6 | 51 | OUQ08064.1 hypothetical protein B5E87_14690 [Massilimicrobiota sp. An142] | diamond | 138 | 44.3 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Massilimicrobiota | Massilimicrobiota sp. An142 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;