RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA929952", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA929952 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2184515 2184515 PRJNA929952_P_NODE_22202_length_178_cov_1.771812_g20908_i0 PRJNA929952 22202 178 1.771812 3.15382536 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 182 1.84e-41   NTclustered gi|2076449834|gb|CP075365.1| 2682144 g20908 i0 85 18.685393258427 180 25 100 2 1 178 1878869 1879048 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM2 chromosome blastn 3326 182 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
8907596 8907596 PRJNA929952_P_NODE_17767_length_236_cov_5.792271_g16473_i0 PRJNA929952 17767 236 5.792271 13.66975956 Armatimonadota 67819 Bacteria Bacteria 309 1.14e-79   NTclustered gi|1996217993|dbj|AP021858.1| 2608984 g16473 i0 91.228 147.03813559322 228 18 96 2 1 227 37152 37378 Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome blastn 34701 309 1 Bacteria   Bacillati Armatimonadota       Candidatus Nitrosymbiomonas Candidatus Nitrosymbiomonas proteolyticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;