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contig_metadata

24 rows where bioproject = "PRJNA929952" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 24 ✖

bioproject 1

  • PRJNA929952 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1254782 1254782 PRJNA929952_P_NODE_5341_length_538_cov_183.601179_g4278_i0 PRJNA929952 5341 538 183.601179 987.77434302 Entosiphon 101492 Euglenozoa other_Eukaryota 436 1.25e-117   NTclustered gi|41400272|gb|AY425008.1| 259048 g4278 i0 81.769 7.2639405204461 554 71 100 19 1 538 2088 1549 Entosiphon sp. TCS-2003 18S ribosomal RNA gene, partial sequence blastn 3908 440 0.990909090909091 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp. TCS 2003
2530486 2530486 PRJNA929952_P_NODE_9182_length_389_cov_17.755556_g7911_i0 PRJNA929952 9182 389 17.755556 69.06911284 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 296 1.56e-75   NTclustered gi|2414483|emb|Y00055.1| 5656 g7911 i0 81.633 92.9820051413882 392 40 94 18 25 389 7058 7444 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 36170 296 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
3460071 3460071 PRJNA929952_P_NODE_8303_length_415_cov_14.966321_g7047_i0 PRJNA929952 8303 415 14.966321 62.11023215 Neobodo designis 312471 Euglenozoa other_Eukaryota 710 0   NTclustered gi|59891960|gb|AY753620.1| 312471 g7047 i0 97.59 100.356626506024 415 9 100 1 1 415 1957 1544 Neobodo designis isolate TeToto3 18S ribosomal RNA gene, partial sequence blastn 41648 710 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
6012424 6012424 PRJNA929952_P_NODE_385_length_1540_cov_159.056254_g251_i0 PRJNA929952 385 1540 159.056254 2449.4663116 Entosiphon sp. 1921133 Euglenozoa other_Eukaryota 459 7.98e-124   NTclustered gi|1547024950|gb|MK213406.1| 1921133 g251 i0 86.925 13.4772727272727 413 49 59 4 353 762 342 752 Entosiphon sp. strain ESC small subunit ribosomal RNA, partial sequence blastn 20755 459 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp.
8562072 8562072 PRJNA929952_P_NODE_13987_length_281_cov_10.289683_g12694_i0 PRJNA929952 13987 281 10.289683 28.91400923 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 514 2.75e-141   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g12694 i0 99.644 25.6334519572954 281 1 100 0 1 281 2397 2677 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 7203 514 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
10183472 10183472 PRJNA929952_P_NODE_14048_length_280_cov_14.984064_g12755_i0 PRJNA929952 14048 280 14.984064 41.9553792 Naegleria 5761 Heterolobosea other_Eukaryota 518 2.12e-142   NTclustered gi|2618963742|gb|OR769034.1| 5762 g12755 i0 100 10.1642857142857 280 0 100 0 1 280 5749 5470 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2846 518 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12388329 12388329 PRJNA929952_P_NODE_24250_length_155_cov_4.539683_g22956_i0 PRJNA929952 24250 155 4.539683 7.03650865 Naegleria andersoni 5764 Heterolobosea other_Eukaryota 287 3.21e-73   NTclustered gi|2351569|gb|U80057.1|NAU80057 5764 g22956 i0 100 98.4451612903226 155 0 100 0 1 155 1835 1681 Naegleria andersoni 18S ribosomal RNA gene, partial sequence blastn 15259 287 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
12388331 12388331 PRJNA929952_P_NODE_2550_length_757_cov_28.263736_g1880_i0 PRJNA929952 2550 757 28.263736 213.95648152 Neobodo designis 312471 Euglenozoa other_Eukaryota 1142 0   NTclustered gi|77994645|gb|DQ207583.1| 312471 g1880 i0 93.955 85.2430647291942 761 36 99 9 3 757 1393 637 Neobodo designis strain HFCC306 18S ribosomal RNA gene, partial sequence blastn 64529 1142 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
12734221 12734221 PRJNA929952_P_NODE_16610_length_248_cov_13.296804_g15316_i0 PRJNA929952 16610 248 13.296804 32.97607392 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 121 6.059999999999999e-23   NTclustered gi|68271530|gb|DQ086711.1| 75058 g15316 i0 76.285 75.2701612903226 253 44 97 14 2 242 609 361 Bodo saltans isolate BODOSALT large subunit ribosomal RNA gene, partial sequence blastn 18667 121 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
13662806 13662806 PRJNA929952_P_NODE_4991_length_559_cov_2.422642_g3965_i0 PRJNA929952 4991 559 2.422642 13.54256878 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 396 2.21e-105   NTclustered gi|2618963742|gb|OR769034.1| 5762 g3965 i0 90.667 15.5098389982111 300 24 83 3 264 559 3015 2716 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 8670 396 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14008789 14008789 PRJNA929952_P_NODE_16131_length_253_cov_10.352679_g14837_i0 PRJNA929952 16131 253 10.352679 26.19227787 Naegleria 5761 Heterolobosea other_Eukaryota 433 7.02e-117   NTclustered gi|2351569|gb|U80057.1|NAU80057 5764 g14837 i0 97.619 92.4189723320158 252 6 99 0 1 252 806 1057 Naegleria andersoni 18S ribosomal RNA gene, partial sequence blastn 23382 433 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
14008790 14008790 PRJNA929952_P_NODE_16551_length_249_cov_2.795455_g15257_i0 PRJNA929952 16551 249 2.795455 6.96068295 Trypanosoma 5690 Euglenozoa other_Eukaryota 76.8 1.34e-9   NTclustered gi|62175522|gb|AC159414.1| 5691 g15257 i0 92.593 22.9879518072289 54 3 21 1 29 81 64567 64514 Trypanosoma brucei chromosome 3 clone RPCI93-25B21, complete sequence blastn 5724 76.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
14937128 14937128 PRJNA929952_P_NODE_3112_length_700_cov_20.165425_g1880_i1 PRJNA929952 3112 700 20.165425 141.157975 Neobodo designis 312471 Euglenozoa other_Eukaryota 822 0   NTclustered gi|77994645|gb|DQ207583.1| 312471 g1880 i1 91.653 81.1942857142857 599 43 85 7 1 595 637 1232 Neobodo designis strain HFCC306 18S ribosomal RNA gene, partial sequence blastn 56836 822 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
15282721 15282721 PRJNA929952_P_NODE_1532_length_940_cov_12.327113_g1092_i0 PRJNA929952 1532 940 12.327113 115.8748622 Naegleria 5761 Heterolobosea other_Eukaryota 1267 0   NTclustered gi|2651357780|gb|PP174296.1| 36333 g1092 i0 98.873 22.3712765957447 710 8 98 0 1 710 3243 3952 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21029 1273 0.99528672427337 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
17487404 17487404 PRJNA929952_P_NODE_10394_length_355_cov_27.904908_g9105_i0 PRJNA929952 10394 355 27.904908 99.0624234 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 228 5.2e-55   NTclustered gi|118574972|gb|EF108310.1| 56452 g9105 i0 78.729 1.01971830985915 362 61 100 13 1 355 419 67 Petalomonas cantuscygni strain CCAP 1259/1 large subunit ribosomal RNA (rnl) gene, partial sequence blastn 362 228 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
17832381 17832381 PRJNA929952_P_NODE_9034_length_393_cov_17.653846_g7765_i0 PRJNA929952 9034 393 17.653846 69.37961478 Naegleria 5761 Heterolobosea other_Eukaryota 726 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g7765 i0 100 95.5038167938931 393 0 100 0 1 393 46 438 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 37533 726 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18760761 18760761 PRJNA929952_P_NODE_14375_length_276_cov_2.230769_g13082_i0 PRJNA929952 14375 276 2.230769 6.15692244 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 272 1.7899999999999999e-68   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g13082 i0 100 11.0760869565217 147 0 79 0 130 276 2935 2789 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 3057 272 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
20035755 20035755 PRJNA929952_P_NODE_13716_length_286_cov_2.906615_g12423_i0 PRJNA929952 13716 286 2.906615 8.3129189 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 189 1.9299999999999998e-43   NTclustered gi|2421781864|ref|XR_008254389.1| 5693 g12423 i0 91.367 74.3916083916084 139 11 48 1 1 138 786 924 Trypanosoma cruzi ribosomal RNA large subunit beta, 3' partial (Tc00.1047053436429.10), partial rRNA blastn 21276 189 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
20381143 20381143 PRJNA929952_P_NODE_20716_length_198_cov_6.988166_g19422_i0 PRJNA929952 20716 198 6.988166 13.83656868 Naegleria 5761 Heterolobosea other_Eukaryota 366 5.4e-97   NTclustered gi|2618963742|gb|OR769034.1| 5762 g19422 i0 100 15.0454545454545 198 0 100 0 1 198 3506 3309 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2979 366 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21311272 21311272 PRJNA929952_P_NODE_8897_length_397_cov_16.008152_g7633_i0 PRJNA929952 8897 397 16.008152 63.55236344 Naegleria andersoni 5764 Heterolobosea other_Eukaryota 658 0   NTclustered gi|2351569|gb|U80057.1|NAU80057 5764 g7633 i0 96.491 95.8765743073048 399 12 100 1 1 397 26 424 Naegleria andersoni 18S ribosomal RNA gene, partial sequence blastn 38063 658 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
21657066 21657066 PRJNA929952_P_NODE_13637_length_287_cov_6.976744_g12344_i0 PRJNA929952 13637 287 6.976744 20.02325528 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 305 1.84e-78   NTclustered gi|2593250474|emb|OY748421.1| 5660 g12344 i0 91.781 92.1533101045296 219 18 76 0 69 287 990178 990396 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 26448 305 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
23861487 23861487 PRJNA929952_P_NODE_7539_length_442_cov_14.150121_g6317_i0 PRJNA929952 7539 442 14.150121 62.54353482 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 806 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g6317 i0 99.548 99.3597285067873 442 2 100 0 1 442 683 1124 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 43917 806 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
25135314 25135314 PRJNA929952_P_NODE_3340_length_679_cov_20.640000_g2523_i0 PRJNA929952 3340 679 20.64 140.1456 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 747 0   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g2523 i0 90.543 143.963181148748 571 38 99 7 117 678 4240 4803 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 97751 747 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
31193604 31193604 PRJNA929952_P_NODE_11215_length_335_cov_42.683007_g9925_i0 PRJNA929952 11215 335 42.683007 142.98807345 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 49.3 9.55e-5   NR KNH07262.1 1314962 g9925 i0 70.6 0.608955223880597 34 10 30.4 0 152 253 84 117 KNH07262.1 hypothetical protein XU18_1794 [Perkinsela sp. CCAP 1560/4] diamond 204 49.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;