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contig_metadata

29 rows where bioproject = "PRJNA929952" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 29 ✖

bioproject 1

  • PRJNA929952 · 29 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3460020 3460020 PRJNA929952_P_NODE_10903_length_342_cov_15.086262_g9613_i0 PRJNA929952 10903 342 15.086262 51.59501604 Lesquereusia spiralis 1260111 Tubulinea other_Eukaryota 344 4.76e-90   NTclustered gi|421976374|gb|JQ519508.1| 1260111 g9613 i0 85.38 44.1169590643275 342 39 99 8 3 342 238 570 Lesquereusia spiralis clone JG10.98_d4 18S ribosomal RNA gene, partial sequence blastn 15088 344 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Lesquereusiidae Lesquereusia Lesquereusia spiralis
3460026 3460026 PRJNA929952_P_NODE_13403_length_291_cov_7.293893_g12110_i0 PRJNA929952 13403 291 7.293893 21.22522863 Spumochlamys bryora 675832 Tubulinea other_Eukaryota 204 7.03e-48   NTclustered gi|259595677|gb|FJ705341.1| 675832 g12110 i0 79.798 2.04123711340206 297 47 100 12 1 291 2168 1879 Spumochlamys bryora clone 1901 18S ribosomal RNA gene, partial sequence blastn 594 204 1 Eukaryota Amoebozoa   Tubulinea Corycida   Microchlamyiidae Spumochlamys Spumochlamys bryora
3460040 3460040 PRJNA929952_P_NODE_20023_length_210_cov_2.872928_g18729_i0 PRJNA929952 20023 210 2.872928 6.0331488 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 220 4.77e-53   NTclustered gi|575488798|gb|KF772979.1| 180228 g18729 i0 88.462 69.6190476190476 182 21 87 0 1 182 191 10 Paramoeba pemaquidensis strain PA027 beta actin mRNA, partial cds blastn 14620 220 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
4737496 4737496 PRJNA929952_P_NODE_11344_length_332_cov_8.696370_g10054_i0 PRJNA929952 11344 332 8.69637 28.8719484 Ripella platypodia 2047821 Discosea other_Eukaryota 300 1.01e-76   NTclustered gi|1269228347|gb|MF683472.1| 2047821 g10054 i0 85.079 94.8403614457831 315 24 90 17 1 300 392 86 Ripella platypodia clone 21701 18S ribosomal RNA gene, partial sequence blastn 31487 300 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
4737511 4737511 PRJNA929952_P_NODE_16524_length_249_cov_7.390909_g15230_i0 PRJNA929952 16524 249 7.390909 18.40336341 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 82.4 2.87e-11   NTclustered gi|221185864|gb|FJ577811.1| 590481 g15230 i0 89.552 16.2208835341365 67 4 27 3 181 247 594 531 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 4039 82.4 1 Eukaryota Amoebozoa             uncultured Amoebozoa
6012432 6012432 PRJNA929952_P_NODE_7205_length_454_cov_35.202353_g6002_i0 PRJNA929952 7205 454 35.202353 159.81868262 Squamamoeba japonica 1167875 Evosea other_Eukaryota 99 5.57e-16   NTclustered gi|381423465|gb|JN638030.1| 1167875 g6002 i0 88.095 0.555066079295154 84 9 19 1 192 275 1749 1667 Squamamoeba japonica strain CCAP 1593/1 clone 2218 18S ribosomal RNA gene, partial sequence blastn 252 99 1 Eukaryota Amoebozoa   Evosea       Squamamoeba Squamamoeba japonica
6358813 6358813 PRJNA929952_P_NODE_15365_length_262_cov_3.536481_g14071_i0 PRJNA929952 15365 262 3.536481 9.26558022 Vannellidae 95227 Discosea other_Eukaryota 148 2.9599999999999996e-31   NTclustered gi|62865947|gb|AY929922.1| 325065 g14071 i0 86.429 43.587786259542 140 14 53 5 121 258 1375 1239 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 11420 148 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
7287244 7287244 PRJNA929952_P_NODE_17566_length_238_cov_15.669856_g16272_i0 PRJNA929952 17566 238 15.669856 37.29425728 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 226 1.1899999999999999e-54   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g16272 i0 83.936 75.3193277310924 249 26 99 7 2 238 33519 33273 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 17926 226 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
9837171 9837171 PRJNA929952_P_NODE_5348_length_538_cov_6.196464_g4285_i0 PRJNA929952 5348 538 6.196464 33.33697632 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 198 6.42e-46   NTclustered gi|909719647|gb|KT185627.1| 5778 g4285 i0 83.258 50.7342007434944 221 31 40 5 292 507 27900 28119 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 27295 198 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
12388292 12388292 PRJNA929952_P_NODE_10870_length_343_cov_3.716561_g9580_i0 PRJNA929952 10870 343 3.716561 12.74780423 Spumochlamys bryora 675832 Tubulinea other_Eukaryota 148 4.02e-31   NTclustered gi|259595677|gb|FJ705341.1| 675832 g9580 i0 75.852 2.05247813411079 352 52 100 20 1 343 1532 1859 Spumochlamys bryora clone 1901 18S ribosomal RNA gene, partial sequence blastn 704 148 1 Eukaryota Amoebozoa   Tubulinea Corycida   Microchlamyiidae Spumochlamys Spumochlamys bryora
12388320 12388320 PRJNA929952_P_NODE_2230_length_801_cov_19.265544_g1621_i0 PRJNA929952 2230 801 19.265544 154.31700744 Phalansterium filosum 857046 Evosea other_Eukaryota 126 4.67e-24   NTclustered gi|300078501|gb|GU001163.1| 857046 g1621 i0 76.496 11.9662921348315 234 54 29 1 366 598 2563 2796 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9585 126 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
14008793 14008793 PRJNA929952_P_NODE_20791_length_197_cov_5.946429_g19497_i0 PRJNA929952 20791 197 5.946429 11.71446513 Vexillifera 218659 Root_unresolved Root_unresolved 171 4.51e-38   NTclustered gi|221185864|gb|FJ577811.1| 590481 g19497 i0 82.5 28.2741116751269 200 30 99 5 1 196 1553 1751 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 5570 171 1 Eukaryota Amoebozoa             uncultured Amoebozoa
14008797 14008797 PRJNA929952_P_NODE_21711_length_184_cov_19.974194_g20417_i0 PRJNA929952 21711 184 19.974194 36.75251696 Flamella 490353 Evosea other_Eukaryota 340 2.99e-89   NTclustered gi|163943979|gb|EU186023.1| 490516 g20417 i0 100 83.7663043478261 184 0 100 0 1 184 1691 1508 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 15413 340 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
14937104 14937104 PRJNA929952_P_NODE_15692_length_258_cov_6.192140_g14398_i0 PRJNA929952 15692 258 6.19214 15.9757212 Paramoeba perurans 437603 Discosea other_Eukaryota 385 2.04e-102   NTclustered gi|145386781|gb|EF216906.1| 437603 g14398 i0 93.511 90.9263565891473 262 12 100 4 1 258 1438 1178 Neoparamoeba perurans strain GD-D1/1 28S large subunit ribosomal RNA gene, partial sequence blastn 23459 385 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
14937141 14937141 PRJNA929952_P_NODE_9112_length_391_cov_16.118785_g7841_i0 PRJNA929952 9112 391 16.118785 63.02444935 Paramoeba aparasomata 2583407 Discosea other_Eukaryota 361 5.47e-95   NTclustered gi|1767098935|gb|MK518072.1| 2583407 g7841 i0 83.619 20.9386189258312 409 41 100 17 1 391 15859 15459 Paramoeba aparasomata mitochondrion, complete genome blastn 8187 361 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba aparasomata
17487417 17487417 PRJNA929952_P_NODE_16254_length_252_cov_2.834081_g14960_i0 PRJNA929952 16254 252 2.834081 7.14188412 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 148 2.83e-31   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g14960 i0 92.381 37.7539682539683 105 7 42 1 1 105 1974 1871 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 9514 148 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
17832363 17832363 PRJNA929952_P_NODE_19114_length_223_cov_13.989691_g17820_i0 PRJNA929952 19114 223 13.989691 31.19701093 Flamella 490353 Evosea other_Eukaryota 379 7.999999999999999e-101   NTclustered gi|163943980|gb|EU186024.1| 490518 g17820 i0 97.309 54.5964125560538 223 6 100 0 1 223 127 349 Flamella fluviatilis 18S ribosomal RNA gene, partial sequence blastn 12175 379 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella fluviatilis
18760771 18760771 PRJNA929952_P_NODE_18735_length_227_cov_13.035354_g17441_i0 PRJNA929952 18735 227 13.035354 29.59025358 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 75 4.32e-9   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g17441 i0 94 1.31277533039648 50 2 22 1 52 100 967 918 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 298 75 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
18760776 18760776 PRJNA929952_P_NODE_20275_length_206_cov_2.468927_g18981_i0 PRJNA929952 20275 206 2.468927 5.08598962 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 176 1.02e-39   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g18981 i0 82.915 1.10194174757282 199 31 95 1 11 206 2762 2960 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 227 176 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
20035764 20035764 PRJNA929952_P_NODE_19536_length_218_cov_3.486772_g18242_i0 PRJNA929952 19536 218 3.486772 7.60116296 Echinamoeba exundans 136450 Tubulinea other_Eukaryota 403 4.62e-108   NTclustered gi|165968562|gb|EU377602.1| 136450 g18242 i0 100 39.6651376146789 218 0 100 0 1 218 76 293 Echinamoeba exundans strain CRIB40 18S ribosomal RNA gene, partial sequence blastn 8647 403 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida   Echinamoebidae Echinamoeba Echinamoeba exundans
20035771 20035771 PRJNA929952_P_NODE_21136_length_192_cov_5.300613_g19842_i0 PRJNA929952 21136 192 5.300613 10.17717696 Flamella fluviatilis 490518 Evosea other_Eukaryota 259 9.08e-65   NTclustered gi|163943980|gb|EU186024.1| 490518 g19842 i0 91.146 52.1302083333333 192 16 100 1 1 192 1317 1507 Flamella fluviatilis 18S ribosomal RNA gene, partial sequence blastn 10009 259 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella fluviatilis
22586147 22586147 PRJNA929952_P_NODE_23358_length_164_cov_4.059259_g22064_i0 PRJNA929952 23358 164 4.059259 6.65718476 Flamella balnearia 490516 Evosea other_Eukaryota 303 3.42e-78   NTclustered gi|163943979|gb|EU186023.1| 490516 g22064 i0 100 53.0792682926829 164 0 100 0 1 164 1345 1508 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 8705 303 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
22932618 22932618 PRJNA929952_P_NODE_12438_length_309_cov_57.367857_g11145_i0 PRJNA929952 12438 309 57.367857 177.26667813 Flamella 490353 Evosea other_Eukaryota 477 4.0199999999999996e-130   NTclustered gi|163943979|gb|EU186023.1| 490516 g11145 i0 94.534 72.5728155339806 311 14 100 3 1 309 614 923 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 22425 477 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
22932645 22932645 PRJNA929952_P_NODE_598_length_1335_cov_17.248086_g403_i0 PRJNA929952 598 1335 17.248086 230.2619481 Paramoeba 200890 Discosea other_Eukaryota 634 1.0699999999999998e-176   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g403 i0 82.415 16.2164794007491 762 101 56 26 461 1205 42177 41432 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 21649 634 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
23861463 23861463 PRJNA929952_P_NODE_21059_length_193_cov_10.621951_g19765_i0 PRJNA929952 21059 193 10.621951 20.50036543 Spumochlamys bryora 675832 Tubulinea other_Eukaryota 215 2.01e-51   NTclustered gi|259595677|gb|FJ705341.1| 675832 g19765 i0 90.303 2.92746113989637 165 15 85 1 30 193 914 1078 Spumochlamys bryora clone 1901 18S ribosomal RNA gene, partial sequence blastn 565 215 1 Eukaryota Amoebozoa   Tubulinea Corycida   Microchlamyiidae Spumochlamys Spumochlamys bryora
23861477 23861477 PRJNA929952_P_NODE_5839_length_513_cov_7.621901_g4740_i0 PRJNA929952 5839 513 7.621901 39.10035213 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 374 9.439999999999999e-99   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g4740 i0 83.493 123.502923976608 418 52 80 13 105 513 32368 32777 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 63357 374 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
24206402 24206402 PRJNA929952_P_NODE_24679_length_151_cov_4.688525_g23385_i0 PRJNA929952 24679 151 4.688525 7.07967275 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 7.21e-20   NTclustered gi|62865955|gb|AY929930.1| 325074 g23385 i0 91.358 54.4172185430464 81 6 53 1 53 132 305 225 Vannella sp. strain 4354/I internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 8217 110 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain 4354/I
25135308 25135308 PRJNA929952_P_NODE_22880_length_170_cov_2.347518_g21586_i0 PRJNA929952 22880 170 2.347518 3.9907806 Cochliopodium minus 313997 Discosea other_Eukaryota 187 3.74e-43   NTclustered gi|330902862|gb|JF298257.1| 313997 g21586 i0 90.196 9.3 153 1 82 1 1 139 404 252 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 1581 187 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
25135329 25135329 PRJNA929952_P_NODE_8520_length_408_cov_324.266491_g7261_i0 PRJNA929952 8520 408 324.266491 1323.00728328 Korotnevella jeppesenii 1678066 Discosea other_Eukaryota 702 0   NTclustered gi|861553759|gb|KP719186.1| 1678066 g7261 i0 98.734 56.968137254902 395 5 97 0 1 395 395 1 Korotnevella jeppesenii strain A4DVDPB clone 4 small subunit ribosomal RNA gene, partial sequence blastn 23243 702 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella jeppesenii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;