RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA929940", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA929940 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31794700 31794700 PRJNA929940_S_NODE_29277_length_197_cov_5.137500_g29042_i0 PRJNA929940 29277 197 5.1375 10.120875 Corticium candelabrum 121492 Porifera other_Eukaryota 52.4 2.05e-6   NR XP_062502956.1 121492 g29042 i0 71 1.23350253807107 31 9 47.2 0 178 86 112 142 XP_062502956.1 glia maturation factor beta-like [Corticium candelabrum] diamond 243 52.4 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
32206283 32206283 PRJNA929940_S_NODE_27678_length_202_cov_1.581818_g27443_i0 PRJNA929940 27678 202 1.581818 3.19527236 Corticium candelabrum 121492 Porifera other_Eukaryota 42.7 0.0206   NR XP_062500474.1 121492 g27443 i0 82.4 0.252475247524752 17 3 25.2 0 24 74 303 319 XP_062500474.1 zinc finger MIZ domain-containing protein 2-like [Corticium candelabrum] diamond 51 42.7 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;