RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA929924" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929924 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8906928 8906928 PRJNA929924_P_NODE_10927_length_224_cov_1.188571_g10764_i0 PRJNA929924 10927 224 1.188571 2.66239904 Keratoisididae 2931962 Cnidaria other_Eukaryota 414 2.1999999999999996e-111   NTclustered gi|2724202515|gb|OR326691.1| 1329534 g10764 i0 100 100.008928571429 224 0 100 0 1 224 12834 13057 Keratoisis wrighti voucher NIWA28280 mitochondrion, complete genome blastn 22402 414 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleralcyonacea Keratoisididae Keratoisis Keratoisis wrighti
11112542 11112542 PRJNA929924_P_NODE_16849_length_165_cov_0.896552_g16686_i0 PRJNA929924 16849 165 0.896552 1.4793108 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 132 1.72e-26   NTclustered gi|2202645792|ref|XM_046996420.1| 2897299 g16686 i0 81.761 0.963636363636364 159 27 96 2 5 162 351 194 PREDICTED: Xenia sp. Carnegie-2017 RING-box protein 1-like (LOC124445670), mRNA blastn 159 132 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;