RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA929924", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA929924 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20035512 20035512 PRJNA929924_P_NODE_16376_length_166_cov_0.888889_g16213_i0 PRJNA929924 16376 166 0.888889 1.47555574 Oehlia diaphana 118614 Fungi Fungi 176 7.91e-40   NTclustered gi|52626585|emb|AJ717317.1| 118614 g16213 i0 86.335 59.1686746987952 161 22 97 0 1 161 340 180 Glomus diaphanum partial btub gene for beta tubulin, exons 1-3 blastn 9822 176 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Oehlia Oehlia diaphana
24205743 24205743 PRJNA929924_P_NODE_13219_length_187_cov_1.304348_g13056_i0 PRJNA929924 13219 187 1.304348 2.43913076 Fungi 4751 Fungi Fungi 340 3.0499999999999998e-89   NTclustered gi|658131632|emb|HF968958.1| 4874 g13056 i0 99.465 129.75935828877 187 1 100 0 1 187 2192 2006 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 24265 340 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;