RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA929922", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA929922 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22585743 22585743 PRJNA929922_S_NODE_70518_length_238_cov_10.151515_g70294_i0 PRJNA929922 70518 238 10.151515 24.1606057 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.021   NTclustered gi|323706731|gb|CP002529.1| 985053 g70294 i0 100 0.117647058823529 28 0 12 0 60 87 336127 336100 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
22585782 22585782 PRJNA929922_S_NODE_74198_length_206_cov_18.203008_g73974_i0 PRJNA929922 74198 206 18.203008 37.49819648 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.018   NTclustered gi|323706731|gb|CP002529.1| 985053 g73974 i0 100 0.135922330097087 28 0 14 0 156 183 336100 336127 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
26961440 26961440 PRJNA929922_P_NODE_147782_length_244_cov_0.900585_g147242_i0 PRJNA929922 147782 244 0.900585 2.1974274 Thermoproteota archaeon 2056631 Archaea Archaea 120 3.98e-31   NR MDQ3852127.1 2056631 g147242 i0 75 1.0327868852459 84 18 99.6 2 1 243 82 165 MDQ3852127.1 S8 family serine peptidase [Thermoproteota archaeon] diamond 252 120 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;