RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA929922" and tax_phylum = "Peploviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA929922 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15281497 15281497 PRJNA929922_P_NODE_135312_length_246_cov_0.890173_g134772_i0 PRJNA929922 135312 246 0.890173 2.18982558 root 1 Root_unresolved Root_unresolved 267 7.289999999999999e-67   NTclustered gi|6180218|gb|AF065710.2|AF065710 36452 g134772 i0 86.179 2.68292682926829 246 34 100 0 1 246 789 1034 Stealth virus 1 clone C16134 T3 blastn 660 267 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus cercopithecinebeta5
20033465 20033465 PRJNA929922_P_NODE_256_length_3374_cov_3.617389_g112_i0 PRJNA929922 256 3374 3.617389 122.05070486 Percavirus equidgamma2 3050281 Viruses Viruses 496 1.35e-134   NTclustered gi|2271301500|gb|MW322569.1| 12657 g112 i0 87.273 6.56550088915234 440 48 67 7 18 452 104326 103890 Equid gammaherpesvirus 2 strain 1-141/67, complete genome blastn 22152 496 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Percavirus Percavirus equidgamma2
25133535 25133535 PRJNA929922_P_NODE_67780_length_294_cov_4.009050_g67240_i0 PRJNA929922 67780 294 4.00905 11.786607 Percavirus equidgamma2 3050281 Viruses Viruses 368 2.38e-97   NTclustered gi|2271301500|gb|MW322569.1| 12657 g67240 i0 89.619 23.9251700680272 289 30 99 0 2 290 103889 104177 Equid gammaherpesvirus 2 strain 1-141/67, complete genome blastn 7034 368 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Percavirus Percavirus equidgamma2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;