RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA929922" and tax_phylum = "Cossaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA929922 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19105376 19105376 PRJNA929922_S_NODE_2075_length_656_cov_4.113208_g1864_i0 PRJNA929922 2075 656 4.113208 26.98264448 Betapolyomavirus 1891714 Viruses Viruses 1181 0   NTclustered gi|5053089|gb|AF156105.1| 1891767 g1864 i0 99.69 80.4923780487805 645 2 98 0 1 645 3546 2902 Simian virus 40 strain VA45-54-2, complete genome blastn 52803 1181 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
30309752 30309752 PRJNA929922_P_NODE_100572_length_256_cov_1.519126_g100032_i0 PRJNA929922 100572 256 1.519126 3.88896256 Bombus cryptarum densovirus 2094261 Viruses Viruses 48.1 5.54e-4   NR YP_009552710.1 2094261 g100032 i0 45.3 1.5 64 29 68 1 11 184 62 125 YP_009552710.1 putative VP1 [Bombus cryptarum densovirus] diamond 384 48.1 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Bombus cryptarum densovirus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;