contig_metadata
48 rows where bioproject = "PRJNA929922", tax_kingdom = "Pseudomonadati" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4736154 | 4736154 | PRJNA929922_P_NODE_97084_length_260_cov_1.235294_g96544_i0 | PRJNA929922 | 97084 | 260 | 1.235294 | 3.2117644 | Helicobacter pylori | 210 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2641857346|gb|CP078338.1| | 210 | g96544 | i0 | 100 | 0.326923076923077 | 29 | 0 | 11 | 0 | 208 | 236 | 231162 | 231190 | Helicobacter pylori strain HpGP-SPA-304 chromosome, complete genome | blastn | 85 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 4736343 | 4736343 | PRJNA929922_S_NODE_18324_length_360_cov_10.543554_g18100_i0 | PRJNA929922 | 18324 | 360 | 10.543554 | 37.9567944 | Malaciobacter marinus | 505249 | Bacteria | Bacteria | 52.8 | 0.034 | NTclustered | gi|1474785413|gb|CP032101.1| | 505249 | g18100 | i0 | 100 | 0.0777777777777778 | 28 | 0 | 8 | 0 | 234 | 261 | 1771291 | 1771318 | Malaciobacter marinus strain JCM 15502 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Malaciobacter | Malaciobacter marinus | ||
| 6357742 | 6357742 | PRJNA929922_P_NODE_34825_length_359_cov_3.101399_g34285_i0 | PRJNA929922 | 34825 | 359 | 3.101399 | 11.13402241 | root | 1 | Root_unresolved | Root_unresolved | 660 | 0 | NTclustered | gi|1969424192|gb|MW548691.1| | 199 | g34285 | i0 | 100 | 101.437325905292 | 357 | 0 | 99 | 0 | 3 | 359 | 281 | 637 | Campylobacter concisus strain KCOM 3603 (=ChDC ETd4) 16S ribosomal RNA gene, partial sequence | blastn | 36416 | 664 | 0.993975903614458 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 8906305 | 8906305 | PRJNA929922_P_NODE_119207_length_249_cov_0.875000_g118667_i0 | PRJNA929922 | 119207 | 249 | 0.875 | 2.17875 | root | 1 | Root_unresolved | Root_unresolved | 460 | 3.16e-125 | NTclustered | gi|2523961402|dbj|AP028347.1| | 197 | g118667 | i0 | 100 | 41.6787148594378 | 249 | 0 | 100 | 0 | 1 | 249 | 3765 | 3517 | Campylobacter jejuni BCH-10335 plasmid pTet_BCH-10335 DNA, complete sequence | blastn | 10378 | 460 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 11112210 | 11112210 | PRJNA929922_S_NODE_60929_length_251_cov_1.539326_g60705_i0 | PRJNA929922 | 60929 | 251 | 1.539326 | 3.86370826 | Sulfurospirillum tamanense | 2813362 | Bacteria | Bacteria | 124 | 7.55e-33 | NR | WP_205458526.1 | 2813362 | g60705 | i0 | 80.8 | 0.932270916334661 | 78 | 15 | 93.2 | 0 | 1 | 234 | 147 | 224 | WP_205458526.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Sulfurospirillum tamanense] | diamond | 234 | 124 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum tamanense | ||
| 12387744 | 12387744 | PRJNA929922_S_NODE_60470_length_252_cov_1.290503_g60246_i0 | PRJNA929922 | 60470 | 252 | 1.290503 | 3.25206756 | Campylobacter sp. RM16192 | 1660080 | Bacteria | Bacteria | 440 | 4.1699999999999984e-119 | NTclustered | gi|1622751281|gb|CP012552.1| | 1660080 | g60246 | i0 | 100 | 7.43650793650794 | 238 | 0 | 94 | 0 | 15 | 252 | 1597455 | 1597692 | Campylobacter sp. RM16192 chromosome, complete genome | blastn | 1874 | 440 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. RM16192 | ||
| 16556089 | 16556089 | PRJNA929922_P_NODE_143433_length_244_cov_1.350877_g142893_i0 | PRJNA929922 | 143433 | 244 | 1.350877 | 3.29613988 | root | 1 | Root_unresolved | Root_unresolved | 451 | 1.86e-122 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g142893 | i0 | 100 | 116.233606557377 | 244 | 0 | 100 | 0 | 1 | 244 | 318867 | 319110 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 28361 | 451 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 17831146 | 17831146 | PRJNA929922_P_NODE_20934_length_416_cov_2.848397_g20399_i0 | PRJNA929922 | 20934 | 416 | 2.848397 | 11.84933152 | Campylobacter | 194 | Bacteria | Bacteria | 763 | 0 | NTclustered | gi|1207769205|gb|MF351718.1| | 199 | g20399 | i0 | 99.76 | 237.117788461538 | 416 | 1 | 100 | 0 | 1 | 416 | 1691 | 1276 | Campylobacter concisus strain H11O-S1 23S ribosomal RNA gene, partial sequence | blastn | 98641 | 763 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 19105096 | 19105096 | PRJNA929922_P_NODE_166735_length_207_cov_4.313433_g166195_i0 | PRJNA929922 | 166735 | 207 | 4.313433 | 8.92880631 | Campylobacter | 194 | Bacteria | Bacteria | 344 | 2.67e-90 | NTclustered | gi|1207769203|gb|MF351716.1| | 199 | g166195 | i0 | 96.618 | 244.734299516908 | 207 | 7 | 100 | 0 | 1 | 207 | 460 | 254 | Campylobacter concisus strain H9O-S1 23S ribosomal RNA gene, partial sequence | blastn | 50660 | 344 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 19105120 | 19105120 | PRJNA929922_P_NODE_24695_length_397_cov_1.546296_g24157_i0 | PRJNA929922 | 24695 | 397 | 1.546296 | 6.13879512 | Campylobacter | 194 | Bacteria | Bacteria | 689 | 0 | NTclustered | gi|1938721720|gb|CP049266.1| | 199 | g24157 | i0 | 97.985 | 231.2040302267 | 397 | 8 | 100 | 0 | 1 | 397 | 1060129 | 1059733 | Campylobacter concisus strain P1CDO3 chromosome, complete genome | blastn | 91788 | 689 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 21309339 | 21309339 | PRJNA929922_P_NODE_62417_length_302_cov_1.777293_g61877_i0 | PRJNA929922 | 62417 | 302 | 1.777293 | 5.36742486 | Malaciobacter marinus | 505249 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|1474785413|gb|CP032101.1| | 505249 | g61877 | i0 | 100 | 0.0927152317880795 | 28 | 0 | 9 | 0 | 104 | 131 | 1771318 | 1771291 | Malaciobacter marinus strain JCM 15502 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Malaciobacter | Malaciobacter marinus | ||
| 21310651 | 21310651 | PRJNA929922_S_NODE_57537_length_256_cov_16.846995_g57313_i0 | PRJNA929922 | 57537 | 256 | 16.846995 | 43.1283072 | Helicobacter pylori | 210 | Bacteria | Bacteria | 60.1 | 1.6e-9 | NR | GAA6954719.1 | 210 | g57313 | i0 | 96.7 | 0.3515625 | 30 | 1 | 35.2 | 0 | 27 | 116 | 50 | 79 | GAA6954719.1 hypothetical protein Kyoto211A_1490 [Helicobacter pylori] | diamond | 90 | 60.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 22931250 | 22931250 | PRJNA929922_P_NODE_106418_length_251_cov_0.865169_g105878_i0 | PRJNA929922 | 106418 | 251 | 0.865169 | 2.17157419 | Sulfurimonadaceae | 2771471 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2159817265|gb|CP087998.1| | 2894755 | g105878 | i0 | 100 | 0.462151394422311 | 29 | 0 | 12 | 0 | 126 | 154 | 2169958 | 2169930 | Sulfurimonas sp. HSL-3221 chromosome, complete genome | blastn | 116 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Thiomicrolovo | Thiomicrolovo sulfuroxydans | ||
| 25480258 | 25480258 | PRJNA929922_P_NODE_40340_length_344_cov_3.036900_g39800_i0 | PRJNA929922 | 40340 | 344 | 3.0369 | 10.446936000000001 | Campylobacter | 194 | Bacteria | Bacteria | 636 | 7.059999999999998e-178 | NTclustered | gi|1207769205|gb|MF351718.1| | 199 | g39800 | i0 | 100 | 250.5 | 344 | 0 | 100 | 0 | 1 | 344 | 408 | 751 | Campylobacter concisus strain H11O-S1 23S ribosomal RNA gene, partial sequence | blastn | 86172 | 636 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 25480374 | 25480374 | PRJNA929922_P_NODE_76300_length_283_cov_1.828571_g75760_i0 | PRJNA929922 | 76300 | 283 | 1.828571 | 5.17485593 | Campylobacter | 194 | Bacteria | Bacteria | 438 | 1.7199999999999995e-118 | NTclustered | gi|1207769205|gb|MF351718.1| | 199 | g75760 | i0 | 94.718 | 229.703180212014 | 284 | 12 | 99 | 3 | 1 | 282 | 394 | 112 | Campylobacter concisus strain H11O-S1 23S ribosomal RNA gene, partial sequence | blastn | 65006 | 438 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 26866895 | 26866895 | PRJNA929922_P_NODE_112041_length_250_cov_0.870056_g111501_i0 | PRJNA929922 | 112041 | 250 | 0.870056 | 2.17514 | Helicobacter pylori | 210 | Bacteria | Bacteria | 40.8 | 0.0252 | NR | GAA6786002.1 | 210 | g111501 | i0 | 53.1 | 0.384 | 32 | 14 | 37.2 | 1 | 250 | 158 | 25 | 56 | GAA6786002.1 hypothetical protein Kyoto199A_5460 [Helicobacter pylori] | diamond | 96 | 40.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27182722 | 27182722 | PRJNA929922_P_NODE_127922_length_247_cov_0.885057_g127382_i0 | PRJNA929922 | 127922 | 247 | 0.885057 | 2.18609079 | Helicobacter pylori | 210 | Bacteria | Bacteria | 78.6 | 2.44e-16 | NR | GAA8735635.1 | 210 | g127382 | i0 | 61.5 | 0.789473684210526 | 65 | 25 | 78.9 | 0 | 2 | 196 | 66 | 130 | GAA8735635.1 hypothetical protein Kyoto147A_1810 [Helicobacter pylori] | diamond | 195 | 78.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27182728 | 27182728 | PRJNA929922_P_NODE_146922_length_244_cov_0.900585_g146382_i0 | PRJNA929922 | 146922 | 244 | 0.900585 | 2.1974274 | Helicobacter pylori | 210 | Bacteria | Bacteria | 60.8 | 4.04e-9 | NR | GAA6860721.1 | 210 | g146382 | i0 | 39.2 | 1.94262295081967 | 79 | 48 | 97.1 | 0 | 242 | 6 | 22 | 100 | GAA6860721.1 hypothetical protein Kyoto206A_1430 [Helicobacter pylori] | diamond | 474 | 60.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27189900 | 27189900 | PRJNA929922_S_NODE_9422_length_434_cov_1.642659_g9198_i0 | PRJNA929922 | 9422 | 434 | 1.642659 | 7.12914006 | root | 1 | Root_unresolved | Root_unresolved | 150 | 2.4999999999999993e-43 | NR | WP_227579456.1 | 195 | g9198 | i0 | 59.8 | 10.5276497695853 | 117 | 47 | 80.9 | 0 | 399 | 49 | 33 | 149 | WP_227579456.1 serine/threonine protein phosphatase, partial [Campylobacter coli] | diamond | 4569 | 150 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 27341121 | 27341121 | PRJNA929922_P_NODE_127783_length_247_cov_0.885057_g127243_i0 | PRJNA929922 | 127783 | 247 | 0.885057 | 2.18609079 | Helicobacter pylori | 210 | Bacteria | Bacteria | 46.2 | 2.68e-4 | NR | GAA8968912.1 | 210 | g127243 | i0 | 46 | 1.51821862348178 | 50 | 27 | 60.7 | 0 | 97 | 246 | 1 | 50 | GAA8968912.1 hypothetical protein Kyoto181A_4280 [Helicobacter pylori] | diamond | 375 | 46.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27474415 | 27474415 | PRJNA929922_S_NODE_67823_length_243_cov_1.358824_g67599_i0 | PRJNA929922 | 67823 | 243 | 1.358824 | 3.30194232 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 40.8 | 0.049 | NR | GAA8783065.1 | 210 | g67599 | i0 | 72.4 | 0.716049382716049 | 29 | 7 | 34.6 | 1 | 122 | 39 | 24 | 52 | GAA8783065.1 hypothetical protein BTM126_15430 [Helicobacter pylori] | diamond | 174 | 40.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27625343 | 27625343 | PRJNA929922_P_NODE_153804_length_243_cov_0.882353_g153264_i0 | PRJNA929922 | 153804 | 243 | 0.882353 | 2.14411779 | Helicobacter pylori | 210 | Bacteria | Bacteria | 96.7 | 5.3399999999999996e-24 | NR | GAA8949211.1 | 210 | g153264 | i0 | 77.2 | 3.51851851851852 | 57 | 13 | 70.4 | 0 | 200 | 30 | 29 | 85 | GAA8949211.1 hypothetical protein Kyoto181A_0990 [Helicobacter pylori] | diamond | 855 | 96.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27625357 | 27625357 | PRJNA929922_P_NODE_47444_length_329_cov_1.031250_g46904_i0 | PRJNA929922 | 47444 | 329 | 1.03125 | 3.3928125 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 43.5 | 0.0155 | NR | WP_240382657.1 | 197 | g46904 | i0 | 48.3 | 0.52887537993921 | 58 | 30 | 52.9 | 0 | 197 | 24 | 63 | 120 | WP_240382657.1 hypothetical protein, partial [Campylobacter jejuni] | diamond | 174 | 43.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 27720368 | 27720368 | PRJNA929922_P_NODE_100224_length_257_cov_0.836957_g99684_i0 | PRJNA929922 | 100224 | 257 | 0.836957 | 2.15097949 | Helicobacter pylori | 210 | Bacteria | Bacteria | 83.2 | 1.94e-18 | NR | GAA8918764.1 | 210 | g99684 | i0 | 50.7 | 1.70428015564202 | 73 | 36 | 85.2 | 0 | 221 | 3 | 7 | 79 | GAA8918764.1 hypothetical protein Kyoto166A_3530 [Helicobacter pylori] | diamond | 438 | 83.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28162104 | 28162104 | PRJNA929922_P_NODE_150625_length_243_cov_0.905882_g150085_i0 | PRJNA929922 | 150625 | 243 | 0.905882 | 2.20129326 | Helicobacter pylori | 210 | Bacteria | Bacteria | 46.2 | 1.92e-4 | NR | GAA8697141.1 | 210 | g150085 | i0 | 48.1 | 0.641975308641975 | 52 | 26 | 63 | 1 | 69 | 221 | 11 | 62 | GAA8697141.1 hypothetical protein Kyoto145A_2860 [Helicobacter pylori] | diamond | 156 | 46.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28446236 | 28446236 | PRJNA929922_P_NODE_106966_length_251_cov_0.865169_g106426_i0 | PRJNA929922 | 106966 | 251 | 0.865169 | 2.17157419 | Helicobacter pylori | 210 | Bacteria | Bacteria | 46.6 | 1.72e-4 | NR | GAA9043165.1 | 210 | g106426 | i0 | 60 | 0.956175298804781 | 40 | 16 | 47.8 | 0 | 2 | 121 | 25 | 64 | GAA9043165.1 hypothetical protein Kyoto184A_02530 [Helicobacter pylori] | diamond | 240 | 46.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28958602 | 28958602 | PRJNA929922_S_NODE_46808_length_276_cov_0.980296_g46584_i0 | PRJNA929922 | 46808 | 276 | 0.980296 | 2.70561696 | Bacteria | 2 | Bacteria | Bacteria | 91.7 | 4.08e-20 | NR | WP_227574815.1 | 195 | g46584 | i0 | 66.7 | 24.7173913043478 | 69 | 23 | 75 | 0 | 215 | 9 | 98 | 166 | WP_227574815.1 AAA family ATPase, partial [Campylobacter coli] | diamond | 6822 | 92 | 0.996739130434783 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 28983128 | 28983128 | PRJNA929922_P_NODE_3708_length_743_cov_1.423881_g3231_i0 | PRJNA929922 | 3708 | 743 | 1.423881 | 10.57943583 | Helicobacter pylori | 210 | Bacteria | Bacteria | 58.2 | 6.31e-7 | NR | GAA6899797.1 | 210 | g3231 | i0 | 35 | 0.323014804845222 | 80 | 52 | 32.3 | 0 | 290 | 51 | 2 | 81 | GAA6899797.1 hypothetical protein Kyoto207A_1280 [Helicobacter pylori] | diamond | 240 | 58.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29431717 | 29431717 | PRJNA929922_P_NODE_69409_length_292_cov_1.356164_g68869_i0 | PRJNA929922 | 69409 | 292 | 1.356164 | 3.95999888 | Bacteria | 2 | Bacteria | Bacteria | 47.8 | 0.00118 | NR | WP_240390123.1 | 201 | g68869 | i0 | 80.8 | 1.17123287671233 | 26 | 5 | 26.7 | 0 | 110 | 187 | 665 | 690 | WP_240390123.1 DNA cytosine methyltransferase [Campylobacter lari] | diamond | 342 | 47.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter lari | ||
| 29456165 | 29456165 | PRJNA929922_P_NODE_94110_length_263_cov_1.242105_g93570_i0 | PRJNA929922 | 94110 | 263 | 1.242105 | 3.26673615 | Helicobacter pylori | 210 | Bacteria | Bacteria | 46.2 | 1.82e-4 | NR | GAA9114287.1 | 210 | g93570 | i0 | 48 | 0.935361216730038 | 50 | 26 | 57 | 0 | 170 | 21 | 3 | 52 | GAA9114287.1 hypothetical protein Kyoto184A_10050 [Helicobacter pylori] | diamond | 246 | 46.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29551040 | 29551040 | PRJNA929922_S_NODE_41810_length_285_cov_5.896226_g41586_i0 | PRJNA929922 | 41810 | 285 | 5.896226 | 16.8042441 | Helicobacter pylori | 210 | Bacteria | Bacteria | 96.3 | 2.12e-23 | NR | WP_322538264.1 | 210 | g41586 | i0 | 50.5 | 2 | 95 | 46 | 98.9 | 1 | 2 | 283 | 12 | 106 | WP_322538264.1 hypothetical protein, partial [Helicobacter pylori] | diamond | 570 | 96.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29582452 | 29582452 | PRJNA929922_P_NODE_67370_length_295_cov_1.373874_g66830_i0 | PRJNA929922 | 67370 | 295 | 1.373874 | 4.0529283 | Helicobacter pylori | 210 | Bacteria | Bacteria | 119 | 1.19e-30 | NR | GAA6795622.1 | 210 | g66830 | i0 | 69.9 | 0.84406779661017 | 83 | 25 | 84.4 | 0 | 47 | 295 | 80 | 162 | GAA6795622.1 hypothetical protein Kyoto200A_0460 [Helicobacter pylori] | diamond | 249 | 119 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29614016 | 29614016 | PRJNA929922_P_NODE_156550_length_242_cov_0.911243_g156010_i0 | PRJNA929922 | 156550 | 242 | 0.911243 | 2.20520806 | Helicobacter pylori | 210 | Bacteria | Bacteria | 40.4 | 0.0222 | NR | GAA8704001.1 | 210 | g156010 | i0 | 66.7 | 0.371900826446281 | 30 | 9 | 37.2 | 1 | 123 | 34 | 16 | 44 | GAA8704001.1 hypothetical protein Kyoto145A_3460 [Helicobacter pylori] | diamond | 90 | 40.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29708697 | 29708697 | PRJNA929922_P_NODE_7770_length_568_cov_2.783838_g7247_i0 | PRJNA929922 | 7770 | 568 | 2.783838 | 15.81219984 | Helicobacter pylori | 210 | Bacteria | Bacteria | 68.2 | 6.55e-12 | NR | GAA8838853.1 | 210 | g7247 | i0 | 78.6 | 0.443661971830986 | 42 | 9 | 22.2 | 0 | 551 | 426 | 2 | 43 | GAA8838853.1 hypothetical protein Kyoto149A_5200 [Helicobacter pylori] | diamond | 252 | 68.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29708700 | 29708700 | PRJNA929922_P_NODE_93070_length_264_cov_1.481675_g92530_i0 | PRJNA929922 | 93070 | 264 | 1.481675 | 3.911622 | Helicobacter pylori | 210 | Bacteria | Bacteria | 87 | 1.4e-20 | NR | GAA9040624.1 | 210 | g92530 | i0 | 87 | 1.04545454545455 | 46 | 6 | 52.3 | 0 | 167 | 30 | 5 | 50 | GAA9040624.1 hypothetical protein Kyoto184A_02050 [Helicobacter pylori] | diamond | 276 | 87 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29740412 | 29740412 | PRJNA929922_P_NODE_95110_length_262_cov_1.222222_g94570_i0 | PRJNA929922 | 95110 | 262 | 1.222222 | 3.20222164 | Helicobacter pylori | 210 | Bacteria | Bacteria | 43.5 | 0.00166 | NR | GAA9043493.1 | 210 | g94570 | i0 | 76 | 0.286259541984733 | 25 | 6 | 28.6 | 0 | 188 | 114 | 4 | 28 | GAA9043493.1 hypothetical protein Kyoto184A_02610 [Helicobacter pylori] | diamond | 75 | 43.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29803729 | 29803729 | PRJNA929922_P_NODE_8271_length_556_cov_3.590062_g7746_i0 | PRJNA929922 | 8271 | 556 | 3.590062 | 19.96074472 | Helicobacter pylori | 210 | Bacteria | Bacteria | 74.7 | 1.17e-13 | NR | GAA6899797.1 | 210 | g7746 | i0 | 60.9 | 0.345323741007194 | 64 | 25 | 34.5 | 0 | 301 | 492 | 54 | 117 | GAA6899797.1 hypothetical protein Kyoto207A_1280 [Helicobacter pylori] | diamond | 192 | 74.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30088046 | 30088046 | PRJNA929922_S_NODE_56592_length_258_cov_1.983784_g56368_i0 | PRJNA929922 | 56592 | 258 | 1.983784 | 5.11816272 | Helicobacter pylori | 210 | Bacteria | Bacteria | 65.9 | 1.17e-11 | NR | WP_322538256.1 | 210 | g56368 | i0 | 96.7 | 0.348837209302326 | 30 | 1 | 34.9 | 0 | 257 | 168 | 78 | 107 | WP_322538256.1 hypothetical protein, partial [Helicobacter pylori] | diamond | 90 | 65.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30119566 | 30119566 | PRJNA929922_P_NODE_5672_length_635_cov_1.606762_g5166_i0 | PRJNA929922 | 5672 | 635 | 1.606762 | 10.2029387 | Helicobacter pylori | 210 | Bacteria | Bacteria | 58.9 | 1.98e-7 | NR | GAA6899797.1 | 210 | g5166 | i0 | 50 | 0.292913385826772 | 62 | 31 | 29.3 | 0 | 221 | 406 | 54 | 115 | GAA6899797.1 hypothetical protein Kyoto207A_1280 [Helicobacter pylori] | diamond | 186 | 58.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30182860 | 30182860 | PRJNA929922_P_NODE_146392_length_244_cov_0.900585_g145852_i0 | PRJNA929922 | 146392 | 244 | 0.900585 | 2.1974274 | Helicobacter pylori | 210 | Bacteria | Bacteria | 70.9 | 4.15e-13 | NR | GAA8686319.1 | 210 | g145852 | i0 | 43.1 | 0.799180327868853 | 65 | 37 | 79.9 | 0 | 202 | 8 | 1 | 65 | GAA8686319.1 hypothetical protein Kyoto145A_1530 [Helicobacter pylori] | diamond | 195 | 70.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30316880 | 30316880 | PRJNA929922_P_NODE_145252_length_244_cov_0.900585_g144712_i0 | PRJNA929922 | 145252 | 244 | 0.900585 | 2.1974274 | root | 1 | Root_unresolved | Root_unresolved | 49.3 | 2.12e-5 | NR | GAA8994717.1 | 210 | g144712 | i0 | 52.8 | 0.897540983606557 | 36 | 17 | 44.3 | 0 | 72 | 179 | 52 | 87 | GAA8994717.1 hypothetical protein Kyoto181A_6190 [Helicobacter pylori] | diamond | 219 | 49.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30372848 | 30372848 | PRJNA929922_P_NODE_117932_length_249_cov_0.875000_g117392_i0 | PRJNA929922 | 117932 | 249 | 0.875 | 2.17875 | Helicobacter pylori | 210 | Bacteria | Bacteria | 62.4 | 8.36e-11 | NR | GAA8957928.1 | 210 | g117392 | i0 | 57.1 | 2.42168674698795 | 49 | 21 | 59 | 0 | 59 | 205 | 13 | 61 | GAA8957928.1 hypothetical protein Kyoto181A_3320 [Helicobacter pylori] | diamond | 603 | 62.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30972927 | 30972927 | PRJNA929922_P_NODE_89994_length_268_cov_0.779487_g89454_i0 | PRJNA929922 | 89994 | 268 | 0.779487 | 2.08902516 | Helicobacter pylori | 210 | Bacteria | Bacteria | 44.3 | 0.0011 | NR | GAA9099776.1 | 210 | g89454 | i0 | 76.9 | 1.88059701492537 | 26 | 6 | 29.1 | 0 | 40 | 117 | 26 | 51 | GAA9099776.1 hypothetical protein Kyoto184A_09160 [Helicobacter pylori] | diamond | 504 | 44.7 | 0.991051454138702 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32276795 | 32276795 | PRJNA929922_S_NODE_3598_length_557_cov_1.826446_g3381_i0 | PRJNA929922 | 3598 | 557 | 1.826446 | 10.17330422 | root | 1 | Root_unresolved | Root_unresolved | 144 | 7.33e-41 | NR | WP_238408432.1 | 210 | g3381 | i0 | 63.2 | 1.71274685816876 | 106 | 39 | 57.1 | 0 | 394 | 77 | 11 | 116 | WP_238408432.1 DUF1398 family protein, partial [Helicobacter pylori] | diamond | 954 | 144 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32459460 | 32459460 | PRJNA929922_P_NODE_156359_length_242_cov_0.911243_g155819_i0 | PRJNA929922 | 156359 | 242 | 0.911243 | 2.20520806 | Helicobacter pylori | 210 | Bacteria | Bacteria | 53.1 | 6.04e-6 | NR | GAA6795622.1 | 210 | g155819 | i0 | 71.4 | 2.16942148760331 | 35 | 10 | 43.4 | 0 | 23 | 127 | 182 | 216 | GAA6795622.1 hypothetical protein Kyoto200A_0460 [Helicobacter pylori] | diamond | 525 | 53.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32774611 | 32774611 | PRJNA929922_P_NODE_2300_length_922_cov_1.342756_g1880_i0 | PRJNA929922 | 2300 | 922 | 1.342756 | 12.38021032 | Helicobacter pylori | 210 | Bacteria | Bacteria | 43.9 | 0.0292 | NR | GAA8853378.1 | 210 | g1880 | i0 | 85.7 | 0.0683297180043384 | 21 | 3 | 6.8 | 0 | 140 | 78 | 6 | 26 | GAA8853378.1 hypothetical protein Kyoto154A_0400 [Helicobacter pylori] | diamond | 63 | 43.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32837621 | 32837621 | PRJNA929922_P_NODE_83780_length_275_cov_0.896040_g83240_i0 | PRJNA929922 | 83780 | 275 | 0.89604 | 2.46411 | Helicobacter pylori | 210 | Bacteria | Bacteria | 50.1 | 4.85e-6 | NR | GAA6795229.1 | 210 | g83240 | i0 | 82.1 | 0.305454545454545 | 28 | 5 | 30.5 | 0 | 20 | 103 | 13 | 40 | GAA6795229.1 hypothetical protein Kyoto200A_0090 [Helicobacter pylori] | diamond | 84 | 50.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32900566 | 32900566 | PRJNA929922_P_NODE_76100_length_284_cov_0.947867_g75560_i0 | PRJNA929922 | 76100 | 284 | 0.947867 | 2.69194228 | Helicobacter pylori | 210 | Bacteria | Bacteria | 65.9 | 3.29e-12 | NR | GAA9183618.1 | 210 | g75560 | i0 | 75.6 | 0.433098591549296 | 41 | 10 | 43.3 | 0 | 191 | 69 | 1 | 41 | GAA9183618.1 hypothetical protein Kyoto193A_2780 [Helicobacter pylori] | diamond | 123 | 65.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;