contig_metadata
17 rows where bioproject = "PRJNA929922", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6011826 | 6011826 | PRJNA929922_S_NODE_58765_length_254_cov_3.513812_g58541_i0 | PRJNA929922 | 58765 | 254 | 3.513812 | 8.92508248 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 372 | 1.56e-98 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g58541 | i0 | 96.053 | 91.2637795275591 | 228 | 9 | 90 | 0 | 21 | 248 | 1292537 | 1292764 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 23181 | 372 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 6357658 | 6357658 | PRJNA929922_P_NODE_159045_length_242_cov_0.911243_g158505_i0 | PRJNA929922 | 159045 | 242 | 0.911243 | 2.20520806 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 132 | 1.3e-34 | NR | MBS1962476.1 | 2053517 | g158505 | i0 | 81.3 | 0.991735537190083 | 80 | 15 | 99.2 | 0 | 3 | 242 | 237 | 316 | MBS1962476.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 240 | 132 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 26905495 | 26905495 | PRJNA929922_P_NODE_149941_length_243_cov_0.905882_g149401_i0 | PRJNA929922 | 149941 | 243 | 0.905882 | 2.20129326 | Bacteria | 2 | Bacteria | Bacteria | 53.5 | 4.77e-6 | NR | WP_338635669.1 | 495820 | g149401 | i0 | 48.9 | 2.34567901234568 | 47 | 24 | 58 | 0 | 221 | 81 | 59 | 105 | WP_338635669.1 IS66 family transposase [Spirobacillus cienkowskii] | diamond | 570 | 53.9 | 0.992578849721707 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Spirobacillus | Spirobacillus cienkowskii | |||
| 26930001 | 26930001 | PRJNA929922_P_NODE_117402_length_249_cov_0.875000_g116862_i0 | PRJNA929922 | 117402 | 249 | 0.875 | 2.17875 | Bdellovibrionales bacterium GWB1_55_8 | 1797386 | Bacteria | Bacteria | 111 | 1.63e-26 | NR | OFZ21655.1 | 1797386 | g116862 | i0 | 63.4 | 1.97590361445783 | 82 | 30 | 98.8 | 0 | 3 | 248 | 318 | 399 | OFZ21655.1 MAG: hypothetical protein A2X94_07850 [Bdellovibrionales bacterium GWB1_55_8] | diamond | 492 | 111 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium GWB1_55_8 | ||||
| 27119452 | 27119452 | PRJNA929922_P_NODE_134042_length_246_cov_0.890173_g133502_i0 | PRJNA929922 | 134042 | 246 | 0.890173 | 2.18982558 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 43.9 | 0.00143 | NR | WP_088565424.1 | 959 | g133502 | i0 | 46.3 | 0.658536585365854 | 54 | 24 | 65.9 | 1 | 176 | 15 | 10 | 58 | WP_088565424.1 hypothetical protein [Bdellovibrio bacteriovorus] | diamond | 162 | 43.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 27246112 | 27246112 | PRJNA929922_P_NODE_112463_length_250_cov_0.870056_g111923_i0 | PRJNA929922 | 112463 | 250 | 0.870056 | 2.17514 | Bdellovibrio sp. HCB2-146 | 3394362 | Bacteria | Bacteria | 48.5 | 1.55e-4 | NR | WP_413941755.1 | 3394362 | g111923 | i0 | 32.2 | 0.708 | 59 | 40 | 70.8 | 0 | 180 | 4 | 32 | 90 | WP_413941755.1 hypothetical protein [Bdellovibrio sp. HCB2-146] | diamond | 177 | 48.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB2-146 | ||
| 27625350 | 27625350 | PRJNA929922_P_NODE_163164_length_241_cov_0.916667_g162624_i0 | PRJNA929922 | 163164 | 241 | 0.916667 | 2.20916747 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 70.9 | 1.73e-13 | NR | MBS1961324.1 | 2053517 | g162624 | i0 | 81 | 0.522821576763486 | 42 | 8 | 52.3 | 0 | 111 | 236 | 1 | 42 | MBS1961324.1 helix-turn-helix domain-containing protein [Bdellovibrionales bacterium] | diamond | 126 | 70.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28509293 | 28509293 | PRJNA929922_P_NODE_117887_length_249_cov_0.875000_g117347_i0 | PRJNA929922 | 117887 | 249 | 0.875 | 2.17875 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 146 | 1.28e-41 | NR | MFN8792081.1 | 2053517 | g117347 | i0 | 78 | 0.987951807228916 | 82 | 18 | 98.8 | 0 | 2 | 247 | 26 | 107 | MFN8792081.1 N-formylglutamate amidohydrolase [Bdellovibrionales bacterium] | diamond | 246 | 146 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28572376 | 28572376 | PRJNA929922_P_NODE_75747_length_284_cov_1.284360_g75207_i0 | PRJNA929922 | 75747 | 284 | 1.28436 | 3.6475824 | Halobacteriovoraceae bacterium | 2026745 | Bacteria | Bacteria | 44.3 | 0.0153 | NR | MCB9095004.1 | 2026745 | g75207 | i0 | 30.8 | 0.823943661971831 | 78 | 46 | 73.9 | 2 | 257 | 48 | 43 | 120 | MCB9095004.1 Fpg/Nei family DNA glycosylase [Halobacteriovoraceae bacterium] | diamond | 234 | 44.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Halobacteriovoraceae | Halobacteriovoraceae bacterium | |||
| 28730301 | 28730301 | PRJNA929922_P_NODE_111787_length_250_cov_0.870056_g111247_i0 | PRJNA929922 | 111787 | 250 | 0.870056 | 2.17514 | Bdellovibrio sp. ArHS | 1569284 | Bacteria | Bacteria | 100 | 3.28e-25 | NR | WP_041875367.1 | 1569284 | g111247 | i0 | 75 | 0.816 | 68 | 17 | 81.6 | 0 | 46 | 249 | 1 | 68 | WP_041875367.1 helix-turn-helix domain-containing protein [Bdellovibrio sp. ArHS] | diamond | 204 | 100 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. ArHS | ||
| 29772049 | 29772049 | PRJNA929922_P_NODE_148251_length_244_cov_0.877193_g147711_i0 | PRJNA929922 | 148251 | 244 | 0.877193 | 2.14035092 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 60.1 | 2.9e-8 | NR | MBY0314976.1 | 2053517 | g147711 | i0 | 47.2 | 0.885245901639344 | 72 | 37 | 87.3 | 1 | 26 | 238 | 3 | 74 | MBY0314976.1 response regulator [Bdellovibrionales bacterium] | diamond | 216 | 60.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30600602 | 30600602 | PRJNA929922_P_NODE_123433_length_248_cov_0.880000_g122893_i0 | PRJNA929922 | 123433 | 248 | 0.88 | 2.1824 | Bdellovibrio | 958 | Bacteria | Bacteria | 140 | 7.73e-37 | NR | WP_291515649.1 | 1569284 | g122893 | i0 | 73.8 | 3.89516129032258 | 80 | 21 | 96.8 | 0 | 4 | 243 | 359 | 438 | WP_291515649.1 S8 family serine peptidase [Bdellovibrio sp. ArHS] | diamond | 966 | 140 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. ArHS | ||
| 30846418 | 30846418 | PRJNA929922_P_NODE_138654_length_245_cov_0.895349_g138114_i0 | PRJNA929922 | 138654 | 245 | 0.895349 | 2.19360505 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 140 | 1.11e-38 | NR | MBX3021331.1 | 2053517 | g138114 | i0 | 86.4 | 2.97551020408163 | 81 | 11 | 99.2 | 0 | 1 | 243 | 85 | 165 | MBX3021331.1 class II fructose-bisphosphatase [Bdellovibrionales bacterium] | diamond | 729 | 140 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31295864 | 31295864 | PRJNA929922_P_NODE_120355_length_249_cov_0.875000_g119815_i0 | PRJNA929922 | 120355 | 249 | 0.875 | 2.17875 | Bdellovibrio | 958 | Bacteria | Bacteria | 109 | 1.07e-25 | NR | WP_374074268.1 | 959 | g119815 | i0 | 57.8 | 6.96385542168675 | 83 | 35 | 100 | 0 | 1 | 249 | 410 | 492 | WP_374074268.1 transglycosylase SLT domain-containing protein [Bdellovibrio bacteriovorus] | diamond | 1734 | 110 | 0.990909090909091 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 32174760 | 32174760 | PRJNA929922_P_NODE_144498_length_244_cov_0.900585_g143958_i0 | PRJNA929922 | 144498 | 244 | 0.900585 | 2.1974274 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 52 | 2e-5 | NR | MFN7685340.1 | 2599941 | g143958 | i0 | 43.1 | 2.54508196721311 | 65 | 37 | 79.9 | 0 | 230 | 36 | 363 | 427 | MFN7685340.1 reverse transcriptase domain-containing protein [Oligoflexia bacterium] | diamond | 621 | 52 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 32269654 | 32269654 | PRJNA929922_P_NODE_123158_length_248_cov_0.880000_g122618_i0 | PRJNA929922 | 123158 | 248 | 0.88 | 2.1824 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 100 | 2.67e-23 | NR | PZQ46810.1 | 349221 | g122618 | i0 | 76.7 | 0.883064516129032 | 73 | 14 | 88.3 | 1 | 1 | 219 | 126 | 195 | PZQ46810.1 MAG: ostA-like family protein [Micavibrio aeruginosavorus] | diamond | 219 | 100 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 32491140 | 32491140 | PRJNA929922_P_NODE_137079_length_246_cov_0.890173_g136539_i0 | PRJNA929922 | 137079 | 246 | 0.890173 | 2.18982558 | Oligoflexus sp. | 1971216 | Bacteria | Bacteria | 110 | 5.62e-26 | NR | WP_324952854.1 | 1971216 | g136539 | i0 | 60.5 | 1.97560975609756 | 81 | 32 | 98.8 | 0 | 244 | 2 | 88 | 168 | WP_324952854.1 M1 family aminopeptidase [Oligoflexus sp.] | diamond | 486 | 110 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;