RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA929922", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA929922 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2529484 2529484 PRJNA929922_P_NODE_64802_length_299_cov_1.022124_g64262_i0 PRJNA929922 64802 299 1.022124 3.05615076 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.002   NTclustered gi|2918369620|emb|OZ237782.1| 311461 g64262 i0 94.444 0.8561872909699 36 2 12 0 32 67 13535190 13535225 Hirudo verbana genome assembly, chromosome: 4 blastn 256 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
16210993 16210993 PRJNA929922_S_NODE_2153_length_648_cov_5.029565_g1942_i0 PRJNA929922 2153 648 5.029565 32.5915812 Hirudo verbana 311461 Annelida Annelida 60.2 3.85e-4   NTclustered gi|2918369710|emb|OZ237789.1| 311461 g1942 i0 100 1.07561728395062 32 0 5 0 467 498 1760047 1760016 Hirudo verbana genome assembly, chromosome: 11 blastn 697 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
21309764 21309764 PRJNA929922_P_NODE_88077_length_270_cov_0.928934_g87537_i0 PRJNA929922 88077 270 0.928934 2.5081218 Ailoscolex lacteospumosus 1046305 Annelida Annelida 52.8 0.025   NTclustered gi|2920003456|emb|OZ238864.1| 1046305 g87537 i0 100 0.103703703703704 28 0 10 0 235 262 24381203 24381176 Ailoscolex lacteospumosus genome assembly, chromosome: 5 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
27821929 27821929 PRJNA929922_P_NODE_73964_length_286_cov_1.446009_g73424_i0 PRJNA929922 73964 286 1.446009 4.13558574 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 95.9 1.39e-20   NR CAH1776006.1 6347 g73424 i0 51.8 2.65384615384615 85 37 85 1 1 243 3277 3361 CAH1776006.1 unnamed protein product [Owenia fusiformis] diamond 759 96.3 0.995846313603323 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
28295242 28295242 PRJNA929922_P_NODE_65466_length_298_cov_1.026667_g64926_i0 PRJNA929922 65466 298 1.026667 3.05946766 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.8 1.04e-4   NR CAH1778976.1 6347 g64926 i0 50 1.32885906040268 42 17 42.3 1 141 16 308 345 CAH1778976.1 unnamed protein product [Owenia fusiformis] diamond 396 50.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
31858049 31858049 PRJNA929922_P_NODE_106617_length_251_cov_0.865169_g106077_i0 PRJNA929922 106617 251 0.865169 2.17157419 Capitella teleta 283909 Annelida Annelida 67.4 7.9e-12   NR ELU02025.1 283909 g106077 i0 48.4 1.52988047808765 64 33 76.5 0 25 216 89 152 ELU02025.1 hypothetical protein CAPTEDRAFT_91793 [Capitella teleta] diamond 384 67.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;