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contig_metadata

10 rows where bioproject = "PRJNA929922", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 10 ✖

tax_kingdom 1

  • Fungi · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA929922 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6358067 6358067 PRJNA929922_S_NODE_5125_length_507_cov_16.557604_g4903_i0 PRJNA929922 5125 507 16.557604 83.94705228 Heterosporis 157917 Fungi Fungi 697 0   NTclustered gi|448278452|gb|KC137548.1| 1289055 g4903 i0 92.769 35.8717948717949 484 31 95 3 26 507 3161 3642 Heterosporis sp. NBDP-2013a isolate MN/WAE small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18187 697 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
14007897 14007897 PRJNA929922_S_NODE_17611_length_365_cov_0.969178_g17387_i0 PRJNA929922 17611 365 0.969178 3.5374997 Fungi 4751 Fungi Fungi 183 1.18e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g17387 i0 95.652 32.9780821917808 115 4 32 1 211 325 5537 5650 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12037 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
14935782 14935782 PRJNA929922_S_NODE_112_length_1750_cov_24.810376_g58_i0 PRJNA929922 112 1750 24.810376 434.18158 Pleistophora mulleri 249366 Fungi Fungi 1655 0   NTclustered gi|134147422|gb|EF119339.1| 249366 g58 i0 84.184 36.6394285714286 1764 210 98 58 31 1750 1363 3101 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 64119 1655 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
16208701 16208701 PRJNA929922_P_NODE_118793_length_249_cov_0.875000_g118253_i0 PRJNA929922 118793 249 0.875 2.17875 Vittaforma corneae 42399 Fungi Fungi 52.8 0.023   NTclustered gi|667642061|ref|XM_007605285.1| 993615 g118253 i0 100 0.112449799196787 28 0 11 0 183 210 276 303 Vittaforma corneae ATCC 50505 uncharacterized protein (VICG_01902), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
23860675 23860675 PRJNA929922_S_NODE_4399_length_528_cov_47.991209_g4177_i0 PRJNA929922 4399 528 47.991209 253.39358352 Pseudoloma neurophilia 146866 Fungi Fungi 972 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g4177 i0 99.811 99.3882575757576 528 1 100 0 1 528 808 281 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 52477 972 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
25134368 25134368 PRJNA929922_S_NODE_34200_length_303_cov_1.982609_g33976_i0 PRJNA929922 34200 303 1.982609 6.00730527 Vavraia culicis 103449 Fungi Fungi 296 1.18e-75   NTclustered gi|667636757|ref|XR_552273.1| 948595 g33976 i0 86.232 1.83168316831683 276 34 90 4 30 303 2634 2361 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 555 296 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
26613191 26613191 PRJNA929922_P_NODE_131321_length_247_cov_0.885057_g130781_i0 PRJNA929922 131321 247 0.885057 2.18609079 Vittaforma corneae ATCC 5 42399 Fungi Fungi 70.9 1.32e-13   NR XP_007605312.1 993615 g130781 i0 72.3 0.57085020242915 47 13 57.1 0 2 142 67 113 XP_007605312.1 uncharacterized protein VICG_01867 [Vittaforma corneae ATCC 50505] diamond 141 70.9 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
30088032 30088032 PRJNA929922_P_NODE_42292_length_340_cov_1.153558_g41752_i0 PRJNA929922 42292 340 1.153558 3.9220972 Pseudoloma neurophilia 146866 Fungi Fungi 90.9 4.35e-19   NR KRH93531.1 146866 g41752 i0 100 0.45 51 0 45 0 154 2 1 51 KRH93531.1 hypothetical protein M153_7960002914 [Pseudoloma neurophilia] diamond 153 90.9 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
30688273 30688273 PRJNA929922_P_NODE_123573_length_248_cov_0.880000_g123033_i0 PRJNA929922 123573 248 0.88 2.1824 Hamiltosporidium tvaerminnensis 1176355 Fungi Fungi 45.8 0.00292   NR TBU00230.1 1176355 g123033 i0 41.8 1.63306451612903 67 31 81 2 205 5 114 172 TBU00230.1 hypothetical protein CWI37_1071p0010 [Hamiltosporidium tvaerminnensis] diamond 405 45.8 1 Eukaryota Opisthokonta Fungi Microsporidia     Dubosqiidae Hamiltosporidium Hamiltosporidium tvaerminnensis
30846412 30846412 PRJNA929922_P_NODE_119694_length_249_cov_0.875000_g119154_i0 PRJNA929922 119694 249 0.875 2.17875 Pseudoloma neurophilia 146866 Fungi Fungi 48.1 1.1e-4   NR KRH92920.1 146866 g119154 i0 95.8 0.289156626506024 24 1 28.9 0 129 58 1 24 KRH92920.1 RNA polymerase II transcription initiation factor TFIIA, large chain [Pseudoloma neurophilia] diamond 72 48.1 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;