RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA929922", tax_kingdom = "Bamfordvirae" and tax_phylum = "Preplasmiviricota"

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tax_superkingdom 1

tax_phylum 1

  • Preplasmiviricota · 4 ✖

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA929922 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6358131 6358131 PRJNA929922_S_NODE_765_length_909_cov_3.638756_g596_i0 PRJNA929922 765 909 3.638756 33.07629204 root 1 Root_unresolved Root_unresolved 1022 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g596 i0 99.82 98.1694169416942 556 1 97 0 327 882 2258 1703 Unidentified adenovirus strain CHOP Ad5 blastn 89236 1022 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
11457720 11457720 PRJNA929922_S_NODE_3529_length_559_cov_11.141975_g3312_i0 PRJNA929922 3529 559 11.141975 62.28364025 root 1 Root_unresolved Root_unresolved 745 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g3312 i0 100 100.497316636852 403 0 100 0 157 559 1228 1630 Unidentified adenovirus strain CHOP Ad5 blastn 56178 745 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
16556506 16556506 PRJNA929922_S_NODE_3713_length_552_cov_33.931106_g3495_i0 PRJNA929922 3713 552 33.931106 187.29970512 root 1 Root_unresolved Root_unresolved 883 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g3495 i0 99.385 93.9601449275362 488 2 97 1 4 491 4069 3583 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 51866 891 0.991021324354658 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
21656222 21656222 PRJNA929922_S_NODE_28817_length_318_cov_1.820408_g28593_i0 PRJNA929922 28817 318 1.820408 5.78889744 root 1 Root_unresolved Root_unresolved 588 1.84e-163   NTclustered gi|1377596870|gb|MF044052.1| 10515 g28593 i0 100 100 318 0 100 0 1 318 2896 2579 human adenovirus 2 isolate HK91, complete genome blastn 31800 588 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;