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contig_metadata

21 rows where bioproject = "PRJNA929922" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 21 ✖

bioproject 1

  • PRJNA929922 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
906762 906762 PRJNA929922_P_NODE_20081_length_422_cov_0.876791_g19546_i0 PRJNA929922 20081 422 0.876791 3.70005802 Prasiola crispa 173492 Plants Plants 56.5 0.003   NTclustered gi|806639635|gb|KR017748.1| 173492 g19546 i0 96.97 0.0781990521327014 33 1 8 0 296 328 12047 12015 Prasiola crispa clone Contig1 chloroplast sequence blastn 33 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Prasiolaceae Prasiola Prasiola crispa
3456876 3456876 PRJNA929922_P_NODE_130403_length_247_cov_0.885057_g129863_i0 PRJNA929922 130403 247 0.885057 2.18609079 Volvox carteri 3067 Plants Plants 54.7 0.006   NTclustered gi|302850276|ref|XM_002956620.1| 3068 g129863 i0 94.444 0.145748987854251 36 1 15 1 199 234 6062 6096 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_107323), partial mRNA blastn 36 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
3457300 3457300 PRJNA929922_P_NODE_151023_length_243_cov_0.905882_g150483_i0 PRJNA929922 151023 243 0.905882 2.20129326 Coccomyxa subellipsoidea 248742 Plants Plants 99 2.77e-16   NTclustered gi|545361910|ref|XM_005646167.1| 574566 g150483 i0 89.61 0.316872427983539 77 8 32 0 37 113 1141 1065 Coccomyxa subellipsoidea C-169 Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit mRNA blastn 77 99 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
6011274 6011274 PRJNA929922_S_NODE_22305_length_341_cov_2.011194_g22081_i0 PRJNA929922 22305 341 2.011194 6.85817154 Desmochloris halophila 138176 Plants Plants 597 3.299999999999999e-166   NTclustered gi|371782123|emb|HE610155.1| 138176 g22081 i0 99.096 105.096774193548 332 3 97 0 10 341 3533 3202 Desmochloris halophila plastid 16S rRNA gene (partial), 23S rRNA gene (partial) and ITS1, strain UTEX 2073 blastn 35838 597 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
7285719 7285719 PRJNA929922_P_NODE_8946_length_542_cov_0.944563_g8418_i0 PRJNA929922 8946 542 0.944563 5.11953146 Trebouxia sp. SL0000003 3350044 Plants Plants 56.5 0.004   NTclustered gi|2917929628|emb|OZ234916.1| 3350044 g8418 i0 96.97 0.182656826568266 33 1 6 0 152 184 1875704 1875672 Trebouxia sp. SL0000003 genome assembly, chromosome: 11 blastn 99 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
26810456 26810456 PRJNA929922_P_NODE_150301_length_243_cov_0.905882_g149761_i0 PRJNA929922 150301 243 0.905882 2.20129326 Eukaryota 2759 Plants Plants 99.4 4.26e-22   NR AAO47330.1 63592 g149761 i0 59.5 2.88888888888889 74 30 91.4 0 9 230 419 492 AAO47330.1 high affinity phosphate transporter [Tetraselmis chuii] diamond 702 99.8 0.995991983967936 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Tetraselmis Tetraselmis chuii
27561834 27561834 PRJNA929922_S_NODE_64924_length_246_cov_2.132948_g64700_i0 PRJNA929922 64924 246 2.132948 5.24705208 Trebouxia sp. C 2796353 Plants Plants 48.1 3.48e-5   NR KAL3158048.1 3373145 g64700 i0 47.9 0.585365853658537 48 25 58.5 0 3 146 14 61 KAL3158048.1 hypothetical protein ABBQ32_011657 [Trebouxia sp. C0010 RCD-2024] diamond 144 48.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024
27909068 27909068 PRJNA929922_P_NODE_122985_length_248_cov_0.880000_g122445_i0 PRJNA929922 122985 248 0.88 2.1824 Coccomyxa subellipsoidea 248742 Plants Plants 46.6 0.00172   NR KAK9909323.1 248742 g122445 i0 96.2 0.314516129032258 26 1 31.5 0 169 246 411 436 KAK9909323.1 hypothetical protein WJX75_000513 [Coccomyxa subellipsoidea] diamond 78 46.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
28382923 28382923 PRJNA929922_P_NODE_104886_length_252_cov_1.206704_g104346_i0 PRJNA929922 104886 252 1.206704 3.04089408 Chlamydomonas reinhardtii 3055 Plants Plants 61.6 9.47e-9   NR XP_042924810.1 3055 g104346 i0 50 1.23809523809524 52 26 61.9 0 215 60 1661 1712 XP_042924810.1 uncharacterized protein CHLRE_05g235400v5 [Chlamydomonas reinhardtii] diamond 312 61.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
28516430 28516430 PRJNA929922_P_NODE_48867_length_326_cov_1.217391_g48327_i0 PRJNA929922 48867 326 1.217391 3.96869466 root 1 Root_unresolved Root_unresolved 61.6 2.46e-8   NR KAJ9518340.1 44745 g48327 i0 36.8 2.60429447852761 95 56 86.5 2 37 318 3014 3105 KAJ9518340.1 hypothetical protein QJQ45_010187 [Haematococcus lacustris] diamond 849 62 0.993548387096774 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
28572380 28572380 PRJNA929922_P_NODE_95267_length_262_cov_1.185185_g94727_i0 PRJNA929922 95267 262 1.185185 3.1051847 Coccomyxa elongata 1965095 Plants Plants 72.4 1.62e-12   NR CAL8462676.1 1965095 g94727 i0 41.7 1.9236641221374 84 48 96.2 1 260 9 111 193 CAL8462676.1 g2209 [Coccomyxa elongata] diamond 504 72.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
28604054 28604054 PRJNA929922_P_NODE_99847_length_257_cov_1.255435_g99307_i0 PRJNA929922 99847 257 1.255435 3.22646795 Chlamydomonas reinhardtii 3055 Plants Plants 58.5 1.25e-7   NR XP_042924810.1 3055 g99307 i0 46.4 6.46692607003891 56 30 65.4 0 238 71 1655 1710 XP_042924810.1 uncharacterized protein CHLRE_05g235400v5 [Chlamydomonas reinhardtii] diamond 1662 58.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
28611099 28611099 PRJNA929922_P_NODE_1047_length_1359_cov_2.371695_g736_i0 PRJNA929922 1047 1359 2.371695 32.23133505 Dunaliellaceae 3043 Plants Plants 246 4.07e-68   NR KAF5826182.1 3046 g736 i0 35.6 1.96247240618102 432 255 92.3 11 77 1330 641 1063 KAF5826182.1 P-loop containing nucleoside triphosphate hydrolase protein [Dunaliella salina] diamond 2667 247 0.995951417004049 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
28705922 28705922 PRJNA929922_P_NODE_75607_length_284_cov_1.459716_g75067_i0 PRJNA929922 75607 284 1.459716 4.14559344 Trebouxia 13786 Plants Plants 140 1.4e-38   NR KAA6421479.1 2608996 g75067 i0 69.5 4.01408450704225 95 28 99.3 1 3 284 175 269 KAA6421479.1 MAG: hypothetical protein FRX49_08423 [Trebouxia sp. A1-2] diamond 1140 140 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
29456143 29456143 PRJNA929922_P_NODE_31950_length_369_cov_0.962838_g31410_i0 PRJNA929922 31950 369 0.962838 3.55287222 Coccomyxa sp. Obi 2315456 Plants Plants 75.1 7.36e-13   NR BDA44396.1 2315456 g31410 i0 35.2 0.853658536585366 105 67 85.4 1 339 25 609 712 BDA44396.1 probable LINE-1 retrotransposable element ORF2 protein at N-terminal half [Coccomyxa sp. Obi] diamond 315 75.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
29905786 29905786 PRJNA929922_P_NODE_52051_length_320_cov_1.214575_g51511_i0 PRJNA929922 52051 320 1.214575 3.88664 Eukaryota 2759 Plants Plants 69.7 1.35e-11   NR KAF5840118.1 3046 g51511 i0 73.9 0.871875 46 12 43.1 0 222 85 150 195 KAF5840118.1 class I glutamine amidotransferase-like protein [Dunaliella salina] diamond 279 70.1 0.994293865905849 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31036282 31036282 PRJNA929922_P_NODE_75_length_7763_cov_2.152666_g32_i0 PRJNA929922 75 7763 2.152666 167.11146158 Dunaliella salina 3046 Plants Plants 671 8.749999999999999e-208   NR KAF5826182.1 3046 g32 i0 37.8 0.414659281205719 1073 617 40.2 22 6696 3574 9 1063 KAF5826182.1 P-loop containing nucleoside triphosphate hydrolase protein [Dunaliella salina] diamond 3219 671 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31580713 31580713 PRJNA929922_S_NODE_58076_length_256_cov_1.098361_g57852_i0 PRJNA929922 58076 256 1.098361 2.81180416 Picochlorum 249344 Plants Plants 129 2.66e-33   NR WPT13115.1 1470871 g57852 i0 77.6 1.9921875 85 19 99.6 0 256 2 86 170 WPT13115.1 50S ribosomal protein L17 [Picochlorum sp. SENEW3] diamond 510 129 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
31636680 31636680 PRJNA929922_P_NODE_140256_length_245_cov_0.895349_g139716_i0 PRJNA929922 140256 245 0.895349 2.19360505 Haematococcus lacustris 44745 Plants Plants 83.2 2.21e-16   NR KAJ9524858.1 44745 g139716 i0 56.3 26.0816326530612 71 31 86.9 0 237 25 155 225 KAJ9524858.1 hypothetical protein QJQ45_003006 [Haematococcus lacustris] diamond 6390 83.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
32118490 32118490 PRJNA929922_P_NODE_162938_length_241_cov_0.916667_g162398_i0 PRJNA929922 162938 241 0.916667 2.20916747 Coccomyxa 41891 Plants Plants 150 9.3e-44   NR AUJ22895.1 1667192 g162398 i0 96.2 1.96680497925311 79 3 98.3 0 3 239 8 86 AUJ22895.1 cysT [Coccomyxa sp. SUA001] diamond 474 150 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. SUA001
32142991 32142991 PRJNA929922_P_NODE_36918_length_354_cov_0.790036_g36378_i0 PRJNA929922 36918 354 0.790036 2.79672744 Dunaliella salina 3046 Plants Plants 91.7 9.69e-19   NR KAF5826182.1 3046 g36378 i0 42.4 1 118 66 98.3 1 3 350 690 807 KAF5826182.1 P-loop containing nucleoside triphosphate hydrolase protein [Dunaliella salina] diamond 354 91.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;