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contig_metadata

17 rows where bioproject = "PRJNA929922", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 17 ✖

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA929922 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2182029 2182029 PRJNA929922_P_NODE_162902_length_241_cov_0.916667_g162362_i0 PRJNA929922 162902 241 0.916667 2.20916747 Bremia lactucae 4779 SAR_Eukaryotes SAR_Eukaryotes 379 8.759999999999998e-101   NTclustered gi|2794721556|ref|XM_067967754.1| 4779 g162362 i0 95.021 1.44398340248963 241 12 100 0 1 241 799 1039 Bremia lactucae uncharacterized protein (CCR75_009715), partial mRNA blastn 348 379 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
12386584 12386584 PRJNA929922_P_NODE_7550_length_574_cov_0.988024_g7027_i0 PRJNA929922 7550 574 0.988024 5.67125776 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 129 1.17e-30   NR XP_067737238.1 164328 g7027 i0 44.2 4.2595818815331 163 89 84.1 2 493 11 510 672 XP_067737238.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Phytophthora ramorum] diamond 2445 129 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
23861030 23861030 PRJNA929922_S_NODE_68099_length_243_cov_0.905882_g67875_i0 PRJNA929922 68099 243 0.905882 2.20129326 Peronospora aestivalis 162107 SAR_Eukaryotes SAR_Eukaryotes 444 3.09e-120   NTclustered gi|145209007|gb|AY035482.2| 162107 g67875 i0 99.588 100 243 1 100 0 1 243 259 17 Peronospora aestivalis isolate HV 167 large subunit ribosomal RNA gene, partial sequence blastn 24300 444 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora aestivalis
25133324 25133324 PRJNA929922_P_NODE_53060_length_318_cov_1.257143_g52520_i0 PRJNA929922 53060 318 1.257143 3.99771474 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 206 2.16e-48   NTclustered gi|673036523|ref|XM_008874001.1| 157072 g52520 i0 78.638 9.47169811320755 323 59 100 8 1 318 1180 863 Aphanomyces invadans hypothetical protein mRNA blastn 3012 206 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
27632338 27632338 PRJNA929922_P_NODE_58624_length_309_cov_0.872881_g58084_i0 PRJNA929922 58624 309 0.872881 2.69720229 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 47.4 0.00171   NR KAH9153253.1 100861 g58084 i0 51.3 2.72815533980583 39 19 37.9 0 228 112 110 148 KAH9153253.1 hypothetical protein AeRB84_004457 [Aphanomyces euteiches] diamond 843 47.8 0.99163179916318 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
27656939 27656939 PRJNA929922_P_NODE_161564_length_241_cov_0.916667_g161024_i0 PRJNA929922 161564 241 0.916667 2.20916747 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00543   NR OQR85254.1 1202772 g161024 i0 44.4 0.560165975103734 45 17 56 2 18 152 618 654 OQR85254.1 hypothetical protein ACHHYP_12041 [Achlya hypogyna] diamond 135 45.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
27751702 27751702 PRJNA929922_P_NODE_124024_length_248_cov_0.880000_g123484_i0 PRJNA929922 124024 248 0.88 2.1824 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00428   NR KAH9107631.1 100861 g123484 i0 40.7 2.61290322580645 54 30 62.9 1 35 190 164 217 KAH9107631.1 hypothetical protein AeMF1_017065, partial [Aphanomyces euteiches] diamond 648 45.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
27877771 27877771 PRJNA929922_P_NODE_108145_length_251_cov_0.865169_g107605_i0 PRJNA929922 108145 251 0.865169 2.17157419 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.00242   NR KAJ8503125.1 4785 g107605 i0 50 0.573705179282869 48 23 56.2 1 215 75 6 53 KAJ8503125.1 hypothetical protein ON010_g19125 [Phytophthora cinnamomi] diamond 144 43.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
28042759 28042759 PRJNA929922_P_NODE_3785_length_737_cov_1.138554_g3305_i0 PRJNA929922 3785 737 1.138554 8.39114298 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 129 3.5799999999999995e-31   NR XP_067797790.1 4785 g3305 i0 55.9 6.05698778833107 127 54 50.9 1 2 376 235 361 XP_067797790.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Phytophthora cinnamomi] diamond 4464 130 0.992307692307692 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
28793285 28793285 PRJNA929922_P_NODE_163487_length_241_cov_0.916667_g162947_i0 PRJNA929922 163487 241 0.916667 2.20916747 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.00151   NR KAF0692072.1 120398 g162947 i0 40 0.746887966804979 60 32 69.7 1 73 240 68 127 KAF0692072.1 hypothetical protein As57867_016730, partial [Aphanomyces stellatus] diamond 180 46.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
29835314 29835314 PRJNA929922_P_NODE_128111_length_247_cov_0.885057_g127571_i0 PRJNA929922 128111 247 0.885057 2.18609079 Peronosclerospora sorghi 230839 SAR_Eukaryotes SAR_Eukaryotes 42 0.047   NR KAI9922459.1 230839 g127571 i0 37.7 1.08097165991903 53 33 64.4 0 245 87 44 96 KAI9922459.1 hypothetical protein PsorP6_001201 [Peronosclerospora sorghi] diamond 267 42 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
29842439 29842439 PRJNA929922_P_NODE_160911_length_241_cov_0.916667_g160371_i0 PRJNA929922 160911 241 0.916667 2.20916747 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 94 4.71e-21   NR KAH9116034.1 100861 g160371 i0 56.3 2.65145228215768 71 31 88.4 0 221 9 124 194 KAH9116034.1 hypothetical protein AeMF1_010004 [Aphanomyces euteiches] diamond 639 94.7 0.992608236536431 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
29937297 29937297 PRJNA929922_P_NODE_130411_length_247_cov_0.885057_g129871_i0 PRJNA929922 130411 247 0.885057 2.18609079 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 57 3.67e-7   NR OWZ09846.1 4795 g129871 i0 42.9 4.2753036437247 56 32 68 0 64 231 389 444 OWZ09846.1 LOW QUALITY PROTEIN: hypothetical protein PHMEG_00017388 [Phytophthora megakarya] diamond 1056 57 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
29937303 29937303 PRJNA929922_P_NODE_64271_length_300_cov_0.863436_g63731_i0 PRJNA929922 64271 300 0.863436 2.590308 root 1 Root_unresolved Root_unresolved 85.1 5.49e-17   NR KAH9088139.1 100861 g63731 i0 39.4 6.93 99 59 99 1 300 4 211 308 KAH9088139.1 hypothetical protein Ae201684P_002241 [Aphanomyces euteiches] diamond 2079 85.9 0.990686845168801 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
30467589 30467589 PRJNA929922_P_NODE_67273_length_295_cov_1.387387_g66733_i0 PRJNA929922 67273 295 1.387387 4.09279165 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 56.6 9.41e-7   NR OQR88966.1 1202772 g66733 i0 34.3 1.00677966101695 99 61 97.6 3 8 295 87 184 OQR88966.1 hypothetical protein ACHHYP_06546 [Achlya hypogyna] diamond 297 56.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
31510384 31510384 PRJNA929922_P_NODE_146596_length_244_cov_0.900585_g146056_i0 PRJNA929922 146596 244 0.900585 2.1974274 Phytophthora fragariae 53985 SAR_Eukaryotes SAR_Eukaryotes 50.4 5.39e-5   NR KAE9063837.1 53985 g146056 i0 57.5 0.983606557377049 40 16 48 1 197 81 84 123 KAE9063837.1 hypothetical protein PF006_g30847 [Phytophthora fragariae] diamond 240 50.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
32774585 32774585 PRJNA929922_P_NODE_105140_length_252_cov_0.854749_g104600_i0 PRJNA929922 105140 252 0.854749 2.15396748 Phytophthora cactorum 29920 SAR_Eukaryotes SAR_Eukaryotes 50.4 8.04e-5   NR KAG2758968.1 29920 g104600 i0 51 6.46428571428571 49 24 58.3 0 208 62 544 592 KAG2758968.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Phytophthora cactorum] diamond 1629 50.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;