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contig_metadata

31 rows where bioproject = "PRJNA929922", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 31 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 31 ✖

bioproject 1

  • PRJNA929922 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1253490 1253490 PRJNA929922_P_NODE_112141_length_250_cov_0.870056_g111601_i0 PRJNA929922 112141 250 0.870056 2.17514 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 132 1.71e-37   NR HET9386780.1 2448054 g111601 i0 79.5 2.076 83 17 99.6 0 249 1 13 95 HET9386780.1 cupin domain-containing protein [Gemmatimonadales bacterium] diamond 519 132 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
4734171 4734171 PRJNA929922_P_NODE_117824_length_249_cov_0.875000_g117284_i0 PRJNA929922 117824 249 0.875 2.17875 Gemmatirosa kalamazoonensis 861299 Bacteria Bacteria 150 7.77e-32   NTclustered gi|575461033|gb|CP007129.1| 861299 g117284 i0 80.288 0.835341365461847 208 33 82 8 38 241 664601 664804 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence blastn 208 150 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatirosa Gemmatirosa kalamazoonensis
9834219 9834219 PRJNA929922_P_NODE_144268_length_244_cov_0.900585_g143728_i0 PRJNA929922 144268 244 0.900585 2.1974274 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 151 2.77e-43   NR MBA2687073.1 2026741 g143728 i0 87.7 6.97131147540984 81 10 99.6 0 1 243 200 280 MBA2687073.1 formamidopyrimidine-DNA glycosylase [Gemmatimonadaceae bacterium] diamond 1701 151 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
13660331 13660331 PRJNA929922_P_NODE_163991_length_241_cov_0.916667_g163451_i0 PRJNA929922 163991 241 0.916667 2.20916747 Roseisolibacter 2093335 Bacteria Bacteria 126 1.7399999999999998e-32   NR WP_284352446.1 2014610 g163451 i0 82.5 1.99170124481328 80 14 99.6 0 241 2 5 84 WP_284352446.1 trigger factor [Roseisolibacter agri] diamond 480 126 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Roseisolibacter Roseisolibacter agri
14934581 14934581 PRJNA929922_P_NODE_161852_length_241_cov_0.916667_g161312_i0 PRJNA929922 161852 241 0.916667 2.20916747 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 68.9 2.1e-11   NR MBP9202051.1 2448054 g161312 i0 72.1 3.16182572614108 43 12 53.5 0 113 241 36 78 MBP9202051.1 chlorophyllide a reductase subunit Y [Gemmatimonadales bacterium] diamond 762 68.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
20032595 20032595 PRJNA929922_P_NODE_129836_length_247_cov_0.885057_g129296_i0 PRJNA929922 129836 247 0.885057 2.18609079 uncultured Gemmatimonadaceae bacterium 246130 Bacteria Bacteria 196 9.75e-46   NTclustered gi|2874253995|emb|OY970320.1| 246130 g129296 i0 85.561 75.3886639676113 187 27 76 0 44 230 381506 381692 MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 blastn 18621 196 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   uncultured Gemmatimonadaceae bacterium
26644819 26644819 PRJNA929922_P_NODE_145681_length_244_cov_0.900585_g145141_i0 PRJNA929922 145681 244 0.900585 2.1974274 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 70.1 8.3e-12   NR HEX6964905.1 2026741 g145141 i0 75 0.39344262295082 32 8 39.3 0 243 148 394 425 HEX6964905.1 ABC transporter ATP-binding protein [Gemmatimonadaceae bacterium] diamond 96 70.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
26898429 26898429 PRJNA929922_P_NODE_102181_length_255_cov_0.895604_g101641_i0 PRJNA929922 102181 255 0.895604 2.2837902 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 66.6 6.84e-12   NR HEY0996964.1 2026741 g101641 i0 60 0.647058823529412 55 22 64.7 0 178 14 48 102 HEY0996964.1 hypothetical protein [Gemmatimonadaceae bacterium] diamond 165 66.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
27119439 27119439 PRJNA929922_P_NODE_109582_length_251_cov_0.865169_g109042_i0 PRJNA929922 109582 251 0.865169 2.17157419 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 52.4 1.59e-5   NR HKV73367.1 2448054 g109042 i0 44.4 0.645418326693227 54 30 64.5 0 1 162 339 392 HKV73367.1 SAM-dependent methyltransferase [Gemmatimonadales bacterium] diamond 162 52.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
27119447 27119447 PRJNA929922_P_NODE_128642_length_247_cov_0.885057_g128102_i0 PRJNA929922 128642 247 0.885057 2.18609079 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 87.8 1.81e-18   NR MEO8576143.1 2448054 g128102 i0 60.8 0.898785425101215 74 27 88.7 2 26 244 36 108 MEO8576143.1 rhodanese-like domain-containing protein [Gemmatimonadales bacterium] diamond 222 87.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
27909054 27909054 PRJNA929922_P_NODE_104225_length_252_cov_2.603352_g103685_i0 PRJNA929922 104225 252 2.603352 6.56044704 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 82.4 5.29e-18   NR HEU5219175.1 2448054 g103685 i0 43.4 0.988095238095238 83 47 98.8 0 252 4 16 98 HEU5219175.1 hypothetical protein [Gemmatimonadales bacterium] diamond 249 82.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
28319786 28319786 PRJNA929922_P_NODE_139186_length_245_cov_0.895349_g138646_i0 PRJNA929922 139186 245 0.895349 2.19360505 Longimicrobium sp. 2029185 Bacteria Bacteria 113 2.6600000000000003e-27   NR HEX8245858.1 2029185 g138646 i0 67.9 1.98367346938776 81 26 99.2 0 3 245 63 143 HEX8245858.1 transposase [Longimicrobium sp.] diamond 486 113 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
28351345 28351345 PRJNA929922_P_NODE_133506_length_246_cov_0.890173_g132966_i0 PRJNA929922 133506 246 0.890173 2.18982558 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 95.5 1.07e-20   NR HEX9485950.1 2448054 g132966 i0 89.4 0.573170731707317 47 5 57.3 0 1 141 607 653 HEX9485950.1 beta-glucosidase BglX [Gemmatimonadales bacterium] diamond 141 95.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
28509300 28509300 PRJNA929922_P_NODE_135207_length_246_cov_0.890173_g134667_i0 PRJNA929922 135207 246 0.890173 2.18982558 Longimicrobium sp. 2029185 Bacteria Bacteria 69.7 1.24e-11   NR HYW10013.1 2029185 g134667 i0 46.4 1.02439024390244 84 42 98.8 1 243 1 286 369 HYW10013.1 hypothetical protein [Longimicrobium sp.] diamond 252 69.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
28737412 28737412 PRJNA929922_P_NODE_158227_length_242_cov_0.911243_g157687_i0 PRJNA929922 158227 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 67.8 5.37e-11   NR HEX9936299.1 2029185 g157687 i0 62.3 4.94628099173554 53 20 65.7 0 159 1 12 64 HEX9936299.1 nucleotide sugar dehydrogenase [Longimicrobium sp.] diamond 1197 67.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
28824710 28824710 PRJNA929922_P_NODE_111528_length_250_cov_0.870056_g110988_i0 PRJNA929922 111528 250 0.870056 2.17514 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 115 1.34e-30   NR HEU5261859.1 2448054 g110988 i0 75.4 9.672 69 17 82.8 0 250 44 79 147 HEU5261859.1 response regulator [Gemmatimonadales bacterium] diamond 2418 115 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
28831998 28831998 PRJNA929922_P_NODE_72308_length_288_cov_1.790698_g71768_i0 PRJNA929922 72308 288 1.790698 5.15721024 Pseudomonadati 3379134 Bacteria Bacteria 99.4 6.28e-22   NR HYR06273.1 2029185 g71768 i0 60 2.38541666666667 80 32 83.3 0 241 2 270 349 HYR06273.1 hypothetical protein [Longimicrobium sp.] diamond 687 99.8 0.995991983967936 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
29172491 29172491 PRJNA929922_P_NODE_158749_length_242_cov_0.911243_g158209_i0 PRJNA929922 158749 242 0.911243 2.20520806 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 47.4 7.4e-4   NR MEO7360771.1 2026741 g158209 i0 46.5 0.880165289256198 71 32 80.6 2 46 240 1 71 MEO7360771.1 hypothetical protein [Gemmatimonadaceae bacterium] diamond 213 47.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
29866992 29866992 PRJNA929922_P_NODE_111211_length_250_cov_1.180791_g110671_i0 PRJNA929922 111211 250 1.180791 2.9519775 Longimicrobium terrae 1639882 Bacteria Bacteria 64.7 1.15e-10   NR WP_170035726.1 1639882 g110671 i0 49.3 0.828 69 33 80.4 1 7 207 90 158 WP_170035726.1 hypothetical protein [Longimicrobium terrae] diamond 207 64.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium terrae
30182854 30182854 PRJNA929922_P_NODE_125992_length_248_cov_0.880000_g125452_i0 PRJNA929922 125992 248 0.88 2.1824 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 122 2.0099999999999997e-30   NR MDB4876858.1 2026742 g125452 i0 71.6 0.979838709677419 81 23 98 0 5 247 367 447 MDB4876858.1 hypothetical protein [Gemmatimonadota bacterium] diamond 243 122 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30372853 30372853 PRJNA929922_P_NODE_133992_length_246_cov_0.890173_g133452_i0 PRJNA929922 133992 246 0.890173 2.18982558 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 124 3.21e-34   NR MEX2154420.1 2026741 g133452 i0 75.3 1.95121951219512 81 20 98.8 0 245 3 73 153 MEX2154420.1 hypothetical protein [Gemmatimonadaceae bacterium] diamond 480 124 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
30663882 30663882 PRJNA929922_P_NODE_146673_length_244_cov_0.900585_g146133_i0 PRJNA929922 146673 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 42.7 0.0375   NR MXW17661.1 2026742 g146133 i0 32.9 1.63524590163934 73 47 89.8 1 19 237 362 432 MXW17661.1 6-bladed beta-propeller [Gemmatimonadota bacterium] diamond 399 43.1 0.990719257540603 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30719926 30719926 PRJNA929922_P_NODE_150994_length_243_cov_0.905882_g150454_i0 PRJNA929922 150994 243 0.905882 2.20129326 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 43.9 0.00191   NR HVE79549.1 2026741 g150454 i0 67.7 0.765432098765432 31 10 38.3 0 151 243 1 31 HVE79549.1 DUF2905 domain-containing protein [Gemmatimonadaceae bacterium] diamond 186 43.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
31320391 31320391 PRJNA929922_P_NODE_161175_length_241_cov_0.916667_g160635_i0 PRJNA929922 161175 241 0.916667 2.20916747 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 107 1.87e-25   NR HWE43584.1 2026741 g160635 i0 69.7 5.5643153526971 76 23 94.6 0 5 232 228 303 HWE43584.1 IS110 family transposase [Gemmatimonadaceae bacterium] diamond 1341 107 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
31478811 31478811 PRJNA929922_P_NODE_54816_length_315_cov_1.190083_g54276_i0 PRJNA929922 54816 315 1.190083 3.74876145 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 94.7 4.64e-20   NR MCA9753274.1 2026742 g54276 i0 59.3 2.27619047619048 81 33 77.1 0 73 315 405 485 MCA9753274.1 PD-(D/E)XK nuclease family protein [Gemmatimonadota bacterium] diamond 717 94.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31826361 31826361 PRJNA929922_P_NODE_123077_length_248_cov_0.880000_g122537_i0 PRJNA929922 123077 248 0.88 2.1824 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 60.8 1.47e-8   NR HEU5262764.1 2448054 g122537 i0 82.9 1.66935483870968 35 6 42.3 0 245 141 312 346 HEU5262764.1 asparaginase [Gemmatimonadales bacterium] diamond 414 60.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
32238126 32238126 PRJNA929922_P_NODE_117758_length_249_cov_0.875000_g117218_i0 PRJNA929922 117758 249 0.875 2.17875 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 73.6 2.61e-14   NR HEY5547042.1 2026741 g117218 i0 63.6 2.08433734939759 55 20 66.3 0 2 166 87 141 HEY5547042.1 hydroxyphenylacetyl-CoA thioesterase PaaI [Gemmatimonadaceae bacterium] diamond 519 73.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
32269667 32269667 PRJNA929922_P_NODE_155198_length_242_cov_0.911243_g154658_i0 PRJNA929922 155198 242 0.911243 2.20520806 Roseisolibacter agri 2014610 Bacteria Bacteria 134 1.08e-35   NR WP_284349206.1 2014610 g154658 i0 76.3 0.991735537190083 80 19 99.2 0 3 242 197 276 WP_284349206.1 serine hydrolase domain-containing protein [Roseisolibacter agri] diamond 240 134 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Roseisolibacter Roseisolibacter agri
32333149 32333149 PRJNA929922_P_NODE_161459_length_241_cov_0.916667_g160919_i0 PRJNA929922 161459 241 0.916667 2.20916747 Longimicrobiales bacterium 2910168 Bacteria Bacteria 148 5.29e-42   NR HUF69077.1 2910168 g160919 i0 90 0.995850622406639 80 8 99.6 0 240 1 112 191 HUF69077.1 dienelactone hydrolase family protein [Longimicrobiales bacterium] diamond 240 148 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
32364552 32364552 PRJNA929922_P_NODE_112019_length_250_cov_0.870056_g111479_i0 PRJNA929922 112019 250 0.870056 2.17514 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 43.1 0.0163   NR HEY0241431.1 2026741 g111479 i0 45.5 0.528 44 24 52.8 0 132 1 40 83 HEY0241431.1 DinB family protein [Gemmatimonadaceae bacterium] diamond 132 43.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
32522921 32522921 PRJNA929922_P_NODE_152719_length_243_cov_0.905882_g152179_i0 PRJNA929922 152719 243 0.905882 2.20129326 Gemmatimonas sp. 1962908 Bacteria Bacteria 62.8 2.7e-9   NR HYW32680.1 1962908 g152179 i0 77.1 0.432098765432099 35 8 43.2 0 105 1 1 35 HYW32680.1 NAD(P)/FAD-dependent oxidoreductase [Gemmatimonas sp.] diamond 105 62.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatimonas Gemmatimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;