RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA929922", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA929922 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28919548 28919548 PRJNA929922_P_NODE_135228_length_246_cov_0.890173_g134688_i0 PRJNA929922 135228 246 0.890173 2.18982558 Candidatus Acetothermia bacterium 2053493 Bacteria Bacteria 52.4 1.52e-5   NR MCI2429917.1 2053493 g134688 i0 68.8 1.5609756097561 32 10 39 0 235 140 510 541 MCI2429917.1 SMP-30/gluconolactonase/LRE family protein [Candidatus Acetothermia bacterium] diamond 384 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Acetothermia bacterium
32617323 32617323 PRJNA929922_S_NODE_59420_length_253_cov_2.994444_g59196_i0 PRJNA929922 59420 253 2.994444 7.57594332 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 43.9 0.0109   NR MBC7099932.1 2306012 g59196 i0 34.6 1.8498023715415 78 44 91.3 2 253 23 6 77 MBC7099932.1 cation transporter [Candidatus Bipolaricaulota bacterium] diamond 468 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;