RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA929922", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Absconditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA929922 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12387456 12387456 PRJNA929922_S_NODE_41130_length_287_cov_1.799065_g40906_i0 PRJNA929922 41130 287 1.799065 5.16331655 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 300 8.58e-77   NTclustered gi|563351663|gb|CP006913.1| 1394709 g40906 i0 91.031 158.547038327526 223 19 77 1 5 226 125869 126091 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 45503 300 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
14935410 14935410 PRJNA929922_P_NODE_77312_length_282_cov_1.435407_g76772_i0 PRJNA929922 77312 282 1.435407 4.04784774 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 211 4.06e-50   NTclustered gi|563351663|gb|CP006913.1| 1394709 g76772 i0 94.203 106.106382978723 138 8 49 0 31 168 126064 125927 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 29922 211 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
18758489 18758489 PRJNA929922_P_NODE_3375_length_771_cov_5.151862_g2907_i0 PRJNA929922 3375 771 5.151862 39.72085602 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 787 0   NTclustered gi|563351663|gb|CP006913.1| 1394709 g2907 i0 85.18 183.198443579767 776 106 100 9 1 771 126020 125249 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 141246 787 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;