RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA929522" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA929522 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26835142 26835142 PRJNA929522_S_NODE_9761_length_243_cov_0.905882_g9691_i0 PRJNA929522 9761 243 0.905882 2.20129326 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 85.9 1.53e-17   NR HDI78119.1 2049433 g9691 i0 61.2 0.827160493827161 67 25 82.7 1 239 39 93 158 HDI78119.1 AMP-dependent synthetase [Desulfobacteraceae bacterium] diamond 201 85.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
27404296 27404296 PRJNA929522_S_NODE_8723_length_249_cov_1.750000_g8653_i0 PRJNA929522 8723 249 1.75 4.3575 Desulfonatronospira 488937 Bacteria Bacteria 76.6 3.3e-16   NR WP_008868844.1 488937 g8653 i0 50.6 1.91566265060241 79 36 94 2 2 235 7 83 WP_008868844.1 MULTISPECIES: RNA recognition motif domain-containing protein [Desulfonatronospira] diamond 477 76.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfonatronovibrionaceae Desulfonatronospira  
27783213 27783213 PRJNA929522_S_NODE_9104_length_247_cov_0.885057_g9034_i0 PRJNA929522 9104 247 0.885057 2.18609079 Desulfobacterales bacterium C 2044940 Bacteria Bacteria 62 6.12e-9   NR OEU54199.1 1869301 g9034 i0 43 1.04453441295547 86 38 97.2 2 242 3 216 296 OEU54199.1 MAG: hypothetical protein BA868_00305 [Desulfobacterales bacterium C00003106] diamond 258 62 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium C00003106
28035718 28035718 PRJNA929522_S_NODE_3785_length_347_cov_1.583942_g3715_i0 PRJNA929522 3785 347 1.583942 5.49627874 Geobacteraceae bacterium 2282154 Bacteria Bacteria 58.9 9e-8   NR NTV48441.1 2282154 g3715 i0 45.5 1.11527377521614 66 34 57.1 1 75 272 25 88 NTV48441.1 sel1 repeat family protein [Geobacteraceae bacterium] diamond 387 58.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae   Geobacteraceae bacterium
29898630 29898630 PRJNA929522_S_NODE_1031_length_629_cov_3.350719_g967_i0 PRJNA929522 1031 629 3.350719 21.07602251 Candidatus Desulfatibia sp. 3101189 Bacteria Bacteria 47.8 0.0158   NR WP_413886086.1 3101189 g967 i0 58.8 0.162162162162162 34 14 16.2 0 254 153 272 305 WP_413886086.1 MORN repeat-containing protein [Candidatus Desulfatibia sp.] diamond 102 47.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales   Candidatus Desulfatibia Candidatus Desulfatibia sp.
30435933 30435933 PRJNA929522_S_NODE_7053_length_270_cov_2.989848_g6983_i0 PRJNA929522 7053 270 2.989848 8.0725896 Desulfobacula sp. 2593537 Bacteria Bacteria 64.7 5.76e-10   NR WP_291460074.1 2593537 g6983 i0 48.4 2.66666666666667 64 28 67.8 2 86 268 2 63 WP_291460074.1 class I SAM-dependent methyltransferase [Desulfobacula sp.] diamond 720 64.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacula Desulfobacula sp.
32086724 32086724 PRJNA929522_S_NODE_398_length_938_cov_2.943353_g355_i0 PRJNA929522 398 938 2.943353 27.60865114 Bacteria 2 Bacteria Bacteria 136 1.63e-33   NR HOV86291.1 2052185 g355 i0 38.3 4.33049040511727 230 128 70.4 8 688 29 126 351 HOV86291.1 hypothetical protein [Syntrophobacteraceae bacterium] diamond 4062 136 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae   Syntrophobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;