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contig_metadata

22 rows where bioproject = "PRJNA929522", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 22 ✖

tax_phylum 1

  • Myxococcota · 22 ✖

tax_kingdom 1

bioproject 1

  • PRJNA929522 · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3456224 3456224 PRJNA929522_S_NODE_2963_length_388_cov_2.177778_g2893_i0 PRJNA929522 2963 388 2.177778 8.44977864 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 152 2.96e-44   NR MBI5501297.1 2026735 g2893 i0 74.7 8.05670103092783 95 24 73.5 0 386 102 77 171 MBI5501297.1 peptidylprolyl isomerase [Deltaproteobacteria bacterium] diamond 3126 152 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
7283421 7283421 PRJNA929522_S_NODE_3546_length_357_cov_1.538732_g3476_i0 PRJNA929522 3546 357 1.538732 5.49327324 root 1 Root_unresolved Root_unresolved 138 4.21e-36   NR TRZ78194.1 2026735 g3476 i0 64.6 9.03361344537815 99 34 82.4 1 357 64 248 346 TRZ78194.1 MAG: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Deltaproteobacteria bacterium] diamond 3225 139 0.992805755395683 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
18756866 18756866 PRJNA929522_S_NODE_2475_length_424_cov_1.504274_g2405_i0 PRJNA929522 2475 424 1.5042739999999999 6.37812176 Myxococcota bacterium 2818507 Bacteria Bacteria 103 1.0300000000000001e-22   NR MEL6179525.1 2818507 g2405 i0 38.5 0.955188679245283 135 71 94.1 2 408 10 152 276 MEL6179525.1 alpha/beta fold hydrolase [Myxococcota bacterium] diamond 405 103 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
23857703 23857703 PRJNA929522_S_NODE_3979_length_340_cov_1.707865_g3909_i0 PRJNA929522 3979 340 1.707865 5.806741 Sorangium cellulosum 56 Bacteria Bacteria 52.8 0.032   NTclustered gi|161158851|emb|AM746676.1| 448385 g3909 i0 100 0.0823529411764706 28 0 8 0 125 152 7725847 7725820 Sorangium cellulosum 'So ce 56' complete genome blastn 28 52.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
27063584 27063584 PRJNA929522_S_NODE_3462_length_361_cov_1.305556_g3392_i0 PRJNA929522 3462 361 1.305556 4.71305716 Corallococcus 83461 Bacteria Bacteria 64.3 3.9e-9   NR WP_147451270.1 2316731 g3392 i0 58.8 2.54293628808864 51 19 40.7 1 2 148 150 200 WP_147451270.1 hypothetical protein [Corallococcus llansteffanensis] diamond 918 64.7 0.993817619783617 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus llansteffanensis
27498976 27498976 PRJNA929522_S_NODE_8783_length_249_cov_0.875000_g8713_i0 PRJNA929522 8783 249 0.875 2.17875 Myxococcota bacterium 2818507 Bacteria Bacteria 54.7 2.47e-6   NR MFC1609988.1 2818507 g8713 i0 72.4 0.349397590361446 29 8 34.9 0 186 100 47 75 MFC1609988.1 WGR domain-containing protein [Myxococcota bacterium] diamond 87 54.7 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
27663990 27663990 PRJNA929522_S_NODE_9024_length_247_cov_2.051724_g8954_i0 PRJNA929522 9024 247 2.051724 5.06775828 Bacteria 2 Bacteria Bacteria 53.9 7.46e-7   NR MFO0583359.1 1872521 g8954 i0 35.4 1.94331983805668 82 51 99.6 1 1 246 23 102 MFO0583359.1 peroxiredoxin-like family protein [Anaeromyxobacter sp.] diamond 480 53.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter sp.
28130479 28130479 PRJNA929522_S_NODE_7345_length_266_cov_1.777202_g7275_i0 PRJNA929522 7345 266 1.777202 4.72735732 Polyangiales bacterium 3034171 Bacteria Bacteria 94 5.170000000000001e-21   NR MFO0563599.1 3034171 g7275 i0 58.8 1.83834586466165 80 33 90.2 0 247 8 15 94 MFO0563599.1 SDR family oxidoreductase [Polyangiales bacterium] diamond 489 94 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
28193303 28193303 PRJNA929522_S_NODE_646_length_779_cov_2.550992_g592_i0 PRJNA929522 646 779 2.550992 19.87222768 Enhygromyxa salina 215803 Bacteria Bacteria 56.2 4.75e-5   NR WP_106092241.1 215803 g592 i0 45 1.32862644415918 60 30 22 1 129 299 291 350 WP_106092241.1 DUF4215 domain-containing protein [Enhygromyxa salina] diamond 1035 56.2 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Enhygromyxa Enhygromyxa salina
28414664 28414664 PRJNA929522_S_NODE_7826_length_259_cov_1.747312_g7756_i0 PRJNA929522 7826 259 1.747312 4.52553808 Polyangiaceae bacterium 2268199 Bacteria Bacteria 62 7.53e-9   NR HYQ43566.1 2268199 g7756 i0 44.6 1.62162162162162 74 40 85.7 1 16 237 271 343 HYQ43566.1 FAD-dependent oxidoreductase [Polyangiaceae bacterium] diamond 420 62 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29620961 29620961 PRJNA929522_S_NODE_7510_length_264_cov_1.000000_g7440_i0 PRJNA929522 7510 264 1 2.64 Myxococcales 29 Bacteria Bacteria 66.2 2.6200000000000003e-10   NR WP_093526154.1 83460 g7440 i0 46.7 5.45454545454545 75 37 81.8 2 240 25 408 482 WP_093526154.1 S8 family peptidase [Stigmatella erecta] diamond 1440 66.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Stigmatella Stigmatella erecta
29677122 29677122 PRJNA929522_S_NODE_990_length_638_cov_1.743363_g926_i0 PRJNA929522 990 638 1.743363 11.12265594 Pyxidicoccus sp. 3LFB2 3383248 Bacteria Bacteria 110 5.85e-24   NR WP_410464491.1 3383248 g926 i0 38 1.6974921630094 184 87 85.1 4 96 638 526 685 WP_410464491.1 S8 family peptidase [Pyxidicoccus sp. 3LFB2] diamond 1083 110 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Pyxidicoccus Pyxidicoccus sp. 3LFB2
30182840 30182840 PRJNA929522_S_NODE_7672_length_261_cov_2.047872_g7602_i0 PRJNA929522 7672 261 2.047872 5.34494592 Myxococcota bacterium 2818507 Bacteria Bacteria 53.1 6.94e-7   NR MEC8422185.1 2818507 g7602 i0 48.8 0.919540229885057 80 41 92 0 21 260 2 81 MEC8422185.1 hypothetical protein [Myxococcota bacterium] diamond 240 53.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30341375 30341375 PRJNA929522_S_NODE_9332_length_246_cov_0.843931_g9262_i0 PRJNA929522 9332 246 0.843931 2.07607026 Archangium lipolyticum 2970465 Bacteria Bacteria 58.2 1.39e-7   NR WP_257450705.1 2970465 g9262 i0 38.4 0.890243902439024 73 45 89 0 221 3 503 575 WP_257450705.1 discoidin domain-containing protein [Archangium lipolyticum] diamond 219 58.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium lipolyticum
30435937 30435937 PRJNA929522_S_NODE_8933_length_248_cov_0.880000_g8863_i0 PRJNA929522 8933 248 0.88 2.1824 Myxococcaceae bacterium 2484252 Bacteria Bacteria 55.8 9.64e-7   NR MFO0595980.1 2484252 g8863 i0 45 0.967741935483871 80 43 96.8 1 248 9 357 435 MFO0595980.1 aminomethyl-transferring glycine dehydrogenase [Myxococcaceae bacterium] diamond 240 55.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
30783179 30783179 PRJNA929522_S_NODE_9394_length_245_cov_1.343023_g9324_i0 PRJNA929522 9394 245 1.343023 3.29040635 Myxococcaceae bacterium 2484252 Bacteria Bacteria 97.4 1.02e-21   NR RYZ13640.1 2484252 g9324 i0 64.9 1.48163265306122 74 19 82 1 244 44 83 156 RYZ13640.1 MAG: hypothetical protein EOO70_08390, partial [Myxococcaceae bacterium] diamond 363 97.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
31067716 31067716 PRJNA929522_S_NODE_10515_length_228_cov_2.090323_g10445_i0 PRJNA929522 10515 228 2.090323 4.76593644 Myxococcota bacterium 2818507 Bacteria Bacteria 57.8 1.43e-7   NR HMV65715.1 2818507 g10445 i0 33.3 0.986842105263158 75 50 98.7 0 227 3 184 258 HMV65715.1 fibrinogen-like YCDxxxxGGGW domain-containing protein [Myxococcota bacterium] diamond 225 57.8 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
31478780 31478780 PRJNA929522_S_NODE_6956_length_272_cov_1.160804_g6886_i0 PRJNA929522 6956 272 1.160804 3.15738688 Sandaracinaceae bacterium 2510337 Bacteria Bacteria 55.5 1.75e-6   NR HEY8431942.1 2510337 g6886 i0 71.4 1.56617647058824 35 10 38.6 0 2 106 602 636 HEY8431942.1 long-chain fatty acid--CoA ligase [Sandaracinaceae bacterium] diamond 426 55.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae   Sandaracinaceae bacterium
31668278 31668278 PRJNA929522_S_NODE_3917_length_343_cov_1.037037_g3847_i0 PRJNA929522 3917 343 1.037037 3.55703691 Archangium lipolyticum 2970465 Bacteria Bacteria 140 5.37e-37   NR WP_257452081.1 2970465 g3847 i0 62.7 0.892128279883382 102 36 89.2 1 26 331 289 388 WP_257452081.1 glycoside hydrolase family 43 protein [Archangium lipolyticum] diamond 306 140 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium lipolyticum
32301478 32301478 PRJNA929522_S_NODE_2979_length_387_cov_1.226115_g2909_i0 PRJNA929522 2979 387 1.226115 4.74506505 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 45.1 0.0249   NR MBI5496070.1 2026735 g2909 i0 32.7 0.782945736434108 101 55 72.1 5 11 289 182 277 MBI5496070.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 303 45.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32459437 32459437 PRJNA929522_S_NODE_6699_length_277_cov_1.132353_g6629_i0 PRJNA929522 6699 277 1.132353 3.13661781 Stigmatella aurantiaca 41 Bacteria Bacteria 72.4 2.08e-12   NR WP_002619851.1 41 g6629 i0 47.8 1.49458483754513 69 34 72.6 1 201 1 510 578 WP_002619851.1 S8 family peptidase [Stigmatella aurantiaca] diamond 414 72.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Stigmatella Stigmatella aurantiaca
32617292 32617292 PRJNA929522_S_NODE_8020_length_257_cov_1.141304_g7950_i0 PRJNA929522 8020 257 1.141304 2.93315128 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 43.1 0.0294   NR MBI5479989.1 2026735 g7950 i0 47.1 0.396887159533074 34 18 39.7 0 102 1 172 205 MBI5479989.1 sporulation protein [Deltaproteobacteria bacterium] diamond 102 43.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;