RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA929522" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929522 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28730297 28730297 PRJNA929522_S_NODE_8487_length_251_cov_0.865169_g8417_i0 PRJNA929522 8487 251 0.865169 2.17157419 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 47.8 7.24e-4   NR GMW01328.1 2030809 g8417 i0 39.4 0.848605577689243 71 37 83.7 2 14 223 810 875 GMW01328.1 MAG: hypothetical protein AMXMBFR84_24650 [Candidatus Hydrogenedentota bacterium] diamond 213 47.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32459432 32459432 PRJNA929522_S_NODE_1719_length_504_cov_2.113689_g1649_i0 PRJNA929522 1719 504 2.113689 10.65299256 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 73.2 1.33e-11   NR MFP6583619.1 2030809 g1649 i0 46.9 0.482142857142857 81 40 46.4 2 407 174 37 117 MFP6583619.1 immunoglobulin-like domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 243 73.2 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;