RNAquarium Metadata Server
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contig_metadata

29 rows where bioproject = "PRJNA929522", tax_phylum = "Bacillota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 29 ✖

tax_phylum 1

  • Bacillota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJNA929522 · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9833221 9833221 PRJNA929522_S_NODE_3728_length_349_cov_1.778986_g3658_i0 PRJNA929522 3728 349 1.778986 6.20866114 Candidatus Enterococcus mangumiae 2230878 Bacteria Bacteria 52.8 0.033   NTclustered gi|2707316588|gb|CP147250.1| 2230878 g3658 i0 100 0.0802292263610315 28 0 8 0 266 293 2257289 2257262 Candidatus Enterococcus mangumiae strain DIV1094 chromosome blastn 28 52.8 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Candidatus Enterococcus mangumiae
10182064 10182064 PRJNA929522_S_NODE_1848_length_488_cov_1.773494_g1778_i0 PRJNA929522 1848 488 1.773494 8.65465072 Heyndrickxia ginsengihumi 363870 Bacteria Bacteria 72 1.47e-11   NR WP_251406586.1 363870 g1778 i0 48.4 2.45286885245902 93 38 54.1 4 273 10 24 111 WP_251406586.1 S8 family peptidase [Heyndrickxia ginsengihumi] diamond 1197 72 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Heyndrickxia Heyndrickxia ginsengihumi
12732858 12732858 PRJNA929522_S_NODE_6090_length_287_cov_1.719626_g6020_i0 PRJNA929522 6090 287 1.719626 4.93532662 root 1 Root_unresolved Root_unresolved 531 2.799999999999999e-146   NTclustered gi|1796975023|gb|CP033086.1| 1280 g6020 i0 100 98.801393728223 287 0 100 0 1 287 2463321 2463607 Staphylococcus aureus strain WH9628 chromosome blastn 28356 531 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus
13658999 13658999 PRJNA929522_S_NODE_6371_length_282_cov_1.473684_g6301_i0 PRJNA929522 6371 282 1.473684 4.15578888 Bacillus paranthracis 2026186 Bacteria Bacteria 150 8.97e-32   NTclustered gi|2168785877|gb|CP089743.1| 2026186 g6301 i0 80.928 87.9929078014184 194 33 68 4 91 282 2904482 2904291 Bacillus paranthracis strain SHOU-BC01 chromosome, complete genome blastn 24814 150 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus paranthracis
16208258 16208258 PRJNA929522_S_NODE_1433_length_549_cov_2.909664_g1363_i0 PRJNA929522 1433 549 2.909664 15.97405536 Bacteria 2 Bacteria Bacteria 99.4 1.68e-20   NR EEG31940.1 537013 g1363 i0 44.3 8.78688524590164 106 59 57.9 0 548 231 392 497 EEG31940.1 chaperone protein DnaK [[Clostridium] methylpentosum DSM 5476] diamond 4824 99.8 0.995991983967936 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   [Clostridium] methylpentosum
16208314 16208314 PRJNA929522_S_NODE_8253_length_253_cov_2.822222_g8183_i0 PRJNA929522 8253 253 2.822222 7.14022166 Trichococcus flocculiformis 82803 Bacteria Bacteria 52.8 0.023   NTclustered gi|2621701196|emb|OY759718.1| 82803 g8183 i0 100 0.110671936758893 28 0 11 0 130 157 1191779 1191752 MAG: Trichococcus flocculiformis isolate 659e37ff-3402-4023-a990-0c9469b16b9d genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Trichococcus Trichococcus flocculiformis
26739552 26739552 PRJNA929522_S_NODE_2781_length_400_cov_2.018349_g2711_i0 PRJNA929522 2781 400 2.018349 8.073396 Clostridia bacterium 2044939 Bacteria Bacteria 77.4 1.51e-13   NR MBP3802252.1 2044939 g2711 i0 48.4 1.17 64 31 48 1 256 65 314 375 MBP3802252.1 hypothetical protein [Clostridia bacterium] diamond 468 77.4 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
26866889 26866889 PRJNA929522_S_NODE_8461_length_251_cov_1.084270_g8391_i0 PRJNA929522 8461 251 1.08427 2.7215177 Bacilli bacterium 1903720 Bacteria Bacteria 131 4.89e-34   NR MBQ3001054.1 1903720 g8391 i0 75.6 3.9203187250996 82 20 98 0 1 246 324 405 MBQ3001054.1 asparagine--tRNA ligase [Bacilli bacterium] diamond 984 131 1 Bacteria   Bacillati Bacillota Bacilli       Bacilli bacterium
26961410 26961410 PRJNA929522_S_NODE_1542_length_529_cov_2.190789_g1472_i0 PRJNA929522 1542 529 2.190789 11.58927381 Paenibacillus sp. SYP-B4298 2996034 Bacteria Bacteria 96.3 1.83e-19   NR WP_270170223.1 2996034 g1472 i0 35.1 3.90737240075614 205 90 93.6 7 2 496 269 470 WP_270170223.1 Ig-like domain-containing protein [Paenibacillus sp. SYP-B4298] diamond 2067 96.3 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus sp. SYP-B4298
26961412 26961412 PRJNA929522_S_NODE_2122_length_456_cov_3.033943_g2052_i0 PRJNA929522 2122 456 3.033943 13.83478008 Ammoniphilus oxalaticus 66863 Bacteria Bacteria 196 2.33e-61   NR WP_120188376.1 66863 g2052 i0 69.9 17.4342105263158 133 40 87.5 0 442 44 1 133 WP_120188376.1 nucleoside-diphosphate kinase [Ammoniphilus oxalaticus] diamond 7950 196 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Ammoniphilus Ammoniphilus oxalaticus
27663989 27663989 PRJNA929522_S_NODE_8804_length_249_cov_0.875000_g8734_i0 PRJNA929522 8804 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 87.8 4.55e-18   NR MBR2138771.1 1903720 g8734 i0 55.3 8.90361445783133 76 31 91.6 1 236 9 80 152 MBR2138771.1 asparagine--tRNA ligase [Bacilli bacterium] diamond 2217 87.8 1 Bacteria   Bacillati Bacillota Bacilli       Bacilli bacterium
27783209 27783209 PRJNA929522_S_NODE_6044_length_288_cov_1.530233_g5974_i0 PRJNA929522 6044 288 1.530233 4.40707104 Clostridiaceae bacterium 1898204 Bacteria Bacteria 72.4 1.19e-12   NR NLM50675.1 1898204 g5974 i0 37.2 3.64583333333333 94 58 97.9 1 283 2 128 220 NLM50675.1 S8 family serine peptidase [Clostridiaceae bacterium] diamond 1050 72.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae   Clostridiaceae bacterium
28169039 28169039 PRJNA929522_S_NODE_5645_length_296_cov_1.367713_g5575_i0 PRJNA929522 5645 296 1.367713 4.04843048 PVC group 1783257 Bacteria Bacteria 48.1 8.85e-4   NR MBO8127033.1 1879010 g5575 i0 34.1 1.77364864864865 91 52 88.2 4 287 27 240 326 MBO8127033.1 sodium-translocating pyrophosphatase [Bacillota bacterium] diamond 525 48.5 0.991752577319588 Bacteria   Bacillati Bacillota         Bacillota bacterium
28509286 28509286 PRJNA929522_S_NODE_9487_length_245_cov_0.895349_g9417_i0 PRJNA929522 9487 245 0.895349 2.19360505 Clostridiaceae bacterium 1898204 Bacteria Bacteria 43.1 0.0273   NR NLD49844.1 1898204 g9417 i0 37.3 0.624489795918367 51 31 61.2 1 212 63 393 443 NLD49844.1 radical SAM protein [Clostridiaceae bacterium] diamond 153 43.1 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae   Clostridiaceae bacterium
28674251 28674251 PRJNA929522_S_NODE_2167_length_451_cov_1.886243_g2097_i0 PRJNA929522 2167 451 1.886243 8.50695593 FCB group 1783270 Bacteria Bacteria 200 3.1100000000000007e-59   NR WP_325394107.1 49981 g2097 i0 60.5 22.5166297117517 147 58 97.8 0 9 449 104 250 WP_325394107.1 aldehyde dehydrogenase [Desulfitobacterium sp.] diamond 10155 202 0.99009900990099 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Desulfitobacteriaceae Desulfitobacterium Desulfitobacterium sp.
29077719 29077719 PRJNA929522_S_NODE_6748_length_276_cov_0.945813_g6678_i0 PRJNA929522 6748 276 0.945813 2.61044388 Acidaminobacter sp. JC 1872102 Bacteria Bacteria 81.3 7.85e-16   NR WP_240840040.1 2530199 g6678 i0 50 1.40217391304348 64 32 69.6 0 205 14 56 119 WP_240840040.1 fatty acid desaturase [Acidaminobacter sp. JC074] diamond 387 81.3 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Acidaminobacteraceae Acidaminobacter Acidaminobacter sp. JC074
29361780 29361780 PRJNA929522_S_NODE_2269_length_442_cov_2.051491_g2199_i0 PRJNA929522 2269 442 2.051491 9.06759022 Clostridiales Family XIII bacterium 3107375 Bacteria Bacteria 87 1.11e-16   NR MDR0596872.1 2137877 g2199 i0 36 5.83710407239819 139 80 94.3 3 420 4 46 175 MDR0596872.1 Ig-like domain-containing protein [Eubacteriales Family XIII. Incertae Sedis bacterium] diamond 2580 87 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Eubacteriales Family XIII. Incertae Sedis   Clostridiales Family XIII bacterium
29361788 29361788 PRJNA929522_S_NODE_8469_length_251_cov_0.921348_g8399_i0 PRJNA929522 8469 251 0.921348 2.31258348 Paenibacillus paridis 2583376 Bacteria Bacteria 43.5 0.0215   NR WP_139993458.1 2583376 g8399 i0 38.6 0.681274900398406 57 34 66.9 1 171 4 303 359 WP_139993458.1 hypothetical protein [Paenibacillus paridis] diamond 171 43.5 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus paridis
29772012 29772012 PRJNA929522_S_NODE_2131_length_455_cov_2.306283_g2061_i0 PRJNA929522 2131 455 2.306283 10.49358765 Candidatus Allofournierella merdigallinarum 2838594 Bacteria Bacteria 92 1.95e-18   NR HJA25952.1 2838594 g2061 i0 38.3 1.97802197802198 149 84 94.3 3 439 11 290 436 HJA25952.1 carboxypeptidase regulatory-like domain-containing protein [Candidatus Allofournierella merdigallinarum] diamond 900 92 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Allofournierella Candidatus Allofournierella merdigallinarum
29866988 29866988 PRJNA929522_S_NODE_7871_length_259_cov_1.123656_g7801_i0 PRJNA929522 7871 259 1.123656 2.91026904 Vallitalea pronyensis 1348613 Bacteria Bacteria 99 5.02e-22   NR WP_212694071.1 1348613 g7801 i0 54.2 1.94594594594595 83 33 96.1 1 252 4 293 370 WP_212694071.1 aldehyde dehydrogenase [Vallitalea pronyensis] diamond 504 99 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Vallitaleaceae Vallitalea Vallitalea pronyensis
30309749 30309749 PRJNA929522_S_NODE_7792_length_260_cov_0.919786_g7722_i0 PRJNA929522 7792 260 0.919786 2.3914436 Paenibacillus graminis 189425 Bacteria Bacteria 77.4 2.96e-14   NR WP_052415696.1 189425 g7722 i0 51.3 0.923076923076923 80 39 92.3 0 1 240 886 965 WP_052415696.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Paenibacillus graminis] diamond 240 77.4 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus graminis
30688265 30688265 PRJNA929522_S_NODE_8293_length_253_cov_1.283333_g8223_i0 PRJNA929522 8293 253 1.283333 3.24683249 Staphylococcus pseudintermedius 283734 Bacteria Bacteria 49.3 1.83e-4   NR WP_323695889.1 283734 g8223 i0 37.2 0.924901185770751 78 45 91.3 2 20 250 71 145 WP_323695889.1 class I SAM-dependent methyltransferase [Staphylococcus pseudintermedius] diamond 234 49.3 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus pseudintermedius
31067719 31067719 PRJNA929522_S_NODE_4255_length_332_cov_0.942085_g4185_i0 PRJNA929522 4255 332 0.942085 3.1277222 Chengkuizengella sediminis 1885917 Bacteria Bacteria 85.9 7.96e-17   NR WP_162036560.1 1885917 g4185 i0 41.9 3.84036144578313 105 60 94.9 1 1 315 737 840 WP_162036560.1 S-layer homology domain-containing protein [Chengkuizengella sediminis] diamond 1275 85.9 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Chengkuizengella Chengkuizengella sediminis
31415329 31415329 PRJNA929522_S_NODE_8656_length_250_cov_0.870056_g8586_i0 PRJNA929522 8656 250 0.870056 2.17514 Virgibacillus necropolis 163877 Bacteria Bacteria 65.5 3.72e-10   NR WP_089533605.1 163877 g8586 i0 53.2 0.744 62 29 74.4 0 248 63 364 425 WP_089533605.1 MFS transporter [Virgibacillus necropolis] diamond 186 65.5 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Virgibacillus Virgibacillus necropolis
31573660 31573660 PRJNA929522_S_NODE_5736_length_294_cov_2.217195_g5666_i0 PRJNA929522 5736 294 2.217195 6.5185533 Clostridia bacterium 2044939 Bacteria Bacteria 77.8 3.09e-14   NR MBP3802252.1 2044939 g5666 i0 57.4 0.551020408163265 54 21 55.1 1 131 292 314 365 MBP3802252.1 hypothetical protein [Clostridia bacterium] diamond 162 77.8 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
32048032 32048032 PRJNA929522_S_NODE_9278_length_246_cov_0.890173_g9208_i0 PRJNA929522 9278 246 0.890173 2.18982558 Streptococcus pseudopneumoniae 257758 Bacteria Bacteria 40.8 0.0247   NR WP_196310494.1 257758 g9208 i0 40.7 0.658536585365854 54 28 62.2 2 194 42 3 55 WP_196310494.1 hypothetical protein, partial [Streptococcus pseudopneumoniae] diamond 162 40.8 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus pseudopneumoniae
32269649 32269649 PRJNA929522_S_NODE_8138_length_255_cov_1.263736_g8068_i0 PRJNA929522 8138 255 1.263736 3.2225268 Aneurinibacillus 55079 Bacteria Bacteria 42.4 0.0459   NR WP_057899844.1 55079 g8068 i0 65.6 0.376470588235294 32 11 37.6 0 188 93 119 150 WP_057899844.1 MULTISPECIES: LysE family translocator [Aneurinibacillus] diamond 96 42.4 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Aneurinibacillus  
32554576 32554576 PRJNA929522_S_NODE_9599_length_244_cov_0.900585_g9529_i0 PRJNA929522 9599 244 0.900585 2.1974274 Clostridia bacterium 2044939 Bacteria Bacteria 66.6 9.4e-11   NR MBQ3149921.1 2044939 g9529 i0 43.4 0.934426229508197 76 41 93.4 1 233 6 81 154 MBQ3149921.1 polysaccharide deacetylase family protein [Clostridia bacterium] diamond 228 66.6 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
32907651 32907651 PRJNA929522_S_NODE_2260_length_443_cov_1.248649_g2190_i0 PRJNA929522 2260 443 1.248649 5.53151507 Bacillati 1783272 Bacteria Bacteria 98.2 1.45e-20   NR WP_044355812.1 1458845 g2190 i0 45.5 1.84875846501129 132 60 81.9 4 401 39 538 668 WP_044355812.1 S-layer homology domain-containing protein [Paenibacillus sp. E194] diamond 819 98.2 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus sp. E194

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;