RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA929522", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

  • Methanobacteriati · 3 ✖

bioproject 1

  • PRJNA929522 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18756886 18756886 PRJNA929522_S_NODE_5695_length_295_cov_1.333333_g5625_i0 PRJNA929522 5695 295 1.333333 3.93333235 Thermoplasmatales archaeon 2268204 Archaea Archaea 62.1 4.55e-5   NTclustered gi|2573961727|gb|CP133596.1| 2268204 g5625 i0 100 0.213559322033898 33 0 11 0 8 40 518122 518154 MAG: Thermoplasmatales archaeon isolate BR_05 chromosome, complete genome blastn 63 62.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
27821915 27821915 PRJNA929522_S_NODE_8464_length_251_cov_1.056180_g8394_i0 PRJNA929522 8464 251 1.05618 2.6510118 Archaea 2157 Archaea Archaea 72.8 6.44e-13   NR MCH2648587.1 2666346 g8394 i0 63.9 2.17529880478088 61 20 71.7 2 246 67 214 273 MCH2648587.1 fasciclin domain-containing protein [Candidatus Poseidoniaceae archaeon] diamond 546 72.8 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae   Candidatus Poseidoniaceae archaeon
32055019 32055019 PRJNA929522_S_NODE_6838_length_274_cov_1.333333_g6768_i0 PRJNA929522 6838 274 1.333333 3.65333242 root 1 Root_unresolved Root_unresolved 90.1 1.05e-18   NR WP_400236246.1 1291540 g6768 i0 70.9 4.21532846715328 55 16 60.2 0 269 105 452 506 WP_400236246.1 acyl-CoA carboxylase subunit beta [Methanomethylophilus alvi] diamond 1155 90.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae Methanomethylophilus Methanomethylophilus alvi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;