RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA929522", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA929522 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27119433 27119433 PRJNA929522_S_NODE_6562_length_279_cov_1.121359_g6492_i0 PRJNA929522 6562 279 1.121359 3.12859161 Rozella allomycis CSF55 988480 Fungi Fungi 55.1 2.29e-6   NR EPZ35267.1 988480 g6492 i0 31.8 0.913978494623656 85 54 91.4 3 6 260 216 296 EPZ35267.1 Epsin-like domain-containing protein [Rozella allomycis CSF55] diamond 255 55.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27720367 27720367 PRJNA929522_S_NODE_9964_length_242_cov_0.911243_g9894_i0 PRJNA929522 9964 242 0.911243 2.20520806 Rozella allomycis CSF55 988480 Fungi Fungi 67 9.62e-11   NR EPZ36100.1 988480 g9894 i0 40 2.97520661157025 80 45 96.7 3 234 1 124 202 EPZ36100.1 Nucleotidyl transferase domain-containing protein [Rozella allomycis CSF55] diamond 720 67 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;