RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA929522", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA929522 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4733808 4733808 PRJNA929522_S_NODE_8184_length_254_cov_1.751381_g8114_i0 PRJNA929522 8184 254 1.751381 4.44850774 Spiroplasma endosymbiont of Cantharis nigra 3066278 Bacteria Bacteria 52.8 0.023   NTclustered gi|2706542411|emb|OZ026470.1| 3066278 g8114 i0 100 0.110236220472441 28 0 11 0 140 167 144249 144276 Spiroplasma endosymbiont of Cantharis nigra isolate 54809 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma endosymbiont of Cantharis nigra
12384461 12384461 PRJNA929522_S_NODE_7690_length_261_cov_1.595745_g7620_i0 PRJNA929522 7690 261 1.595745 4.16489445 Spiroplasma endosymbiont of Cantharis nigra 3066278 Bacteria Bacteria 56.5 0.002   NTclustered gi|2706542411|emb|OZ026470.1| 3066278 g7620 i0 100 0.329501915708812 30 0 11 0 104 133 144249 144278 Spiroplasma endosymbiont of Cantharis nigra isolate 54809 genome assembly, chromosome: 1 blastn 86 56.5 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma endosymbiont of Cantharis nigra

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;