RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA929522", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA929522 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13659004 13659004 PRJNA929522_S_NODE_7111_length_269_cov_6.275510_g7041_i0 PRJNA929522 7111 269 6.27551 16.8811219 Amorphochlora amoebiformis 1561963 SAR_Eukaryotes SAR_Eukaryotes 204 6.43e-48   NTclustered gi|33346934|gb|AY251797.1| 1561963 g7041 i0 83.036 80.9925650557621 224 38 83 0 2 225 447 224 Lotharella amoeboformis ubiquitin/actin fusion protein 2 gene, partial cds blastn 21787 204 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Amorphochlora Amorphochlora amoebiformis
20032008 20032008 PRJNA929522_S_NODE_7616_length_262_cov_1.777778_g7546_i0 PRJNA929522 7616 262 1.777778 4.65777836 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 117 1.47e-28   NR MES1908712.1 1215613 g7546 i0 63 3.74427480916031 81 30 92.7 0 2 244 401 481 MES1908712.1 hypothetical protein [Cercozoa sp. M6MM] diamond 981 118 0.991525423728814 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
24205005 24205005 PRJNA929522_S_NODE_3119_length_379_cov_1.509804_g3049_i0 PRJNA929522 3119 379 1.509804 5.72215716 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 228 5.589999999999998e-55   NTclustered gi|1011058105|ref|NC_029743.1| 74820 g3049 i0 79.936 77.3641160949868 314 59 82 3 65 376 14266 14577 Lotharella vacuolata plastid DNA, complete sequence, strain: CCMP240 blastn 29321 230 0.991304347826087 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Lotharella Lotharella vacuolata
32427747 32427747 PRJNA929522_S_NODE_5859_length_292_cov_1.054795_g5789_i0 PRJNA929522 5859 292 1.054795 3.0800014 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 129 7.009999999999998e-35   NR MES1909310.1 1215613 g5789 i0 59.2 1.00684931506849 98 33 93.5 2 3 275 128 225 MES1909310.1 hypothetical protein [Cercozoa sp. M6MM] diamond 294 129 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;