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contig_metadata

33 rows where bioproject = "PRJNA929522", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 33 ✖

tax_clade 1

  • Sar · 33 ✖

bioproject 1

  • PRJNA929522 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6008583 6008583 PRJNA929522_S_NODE_2605_length_415_cov_1.342105_g2535_i0 PRJNA929522 2605 415 1.342105 5.56973575 Skeletonema marinoi 267567 SAR_Eukaryotes SAR_Eukaryotes 170 7.88e-52   NR KAK1732323.1 267567 g2535 i0 74.8 1.54698795180723 107 27 77.3 0 3 323 2 108 KAK1732323.1 peptidyl-prolyl cis-trans isomerase, FKBP type [Skeletonema marinoi] diamond 642 170 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
9833231 9833231 PRJNA929522_S_NODE_5088_length_308_cov_1.970213_g5018_i0 PRJNA929522 5088 308 1.970213 6.06825604 Seminavis robusta 568900 SAR_Eukaryotes SAR_Eukaryotes 139 7.12e-36   NR CAB9500329.1 568900 g5018 i0 65.7 0.993506493506494 102 35 99.4 0 2 307 502 603 CAB9500329.1 Adenylate kinase (Fragment) [Seminavis robusta] diamond 306 139 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta
14933294 14933294 PRJNA929522_S_NODE_9372_length_245_cov_1.790698_g9302_i0 PRJNA929522 9372 245 1.790698 4.3872101 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 152 6.769999999999998e-42   NR KAL3816256.1 382380 g9302 i0 84 4.95918367346939 81 13 99.2 0 1 243 205 285 KAL3816256.1 hypothetical protein ACHAXA_000195 [Cyclostephanos tholiformis] diamond 1215 152 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclostephanos Cyclostephanos tholiformis
16208263 16208263 PRJNA929522_S_NODE_233_length_1155_cov_2.049908_g202_i0 PRJNA929522 233 1155 2.049908 23.6764374 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 501 3.7599999999999996e-157   NR GFH49755.1 426638 g202 i0 77.1 12.3116883116883 314 70 81.6 1 1 942 150 461 GFH49755.1 hypothetical protein CTEN210_06231 [Chaetoceros tenuissimus] diamond 14220 504 0.994047619047619 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
17483538 17483538 PRJNA929522_S_NODE_1114_length_608_cov_1.345794_g1049_i0 PRJNA929522 1114 608 1.345794 8.18242752 Cylindrotheca closterium 2856 SAR_Eukaryotes SAR_Eukaryotes 257 4.21e-82   NR CAJ1937478.1 2856 g1049 i0 62.4 0.996710526315789 202 75 99.2 1 606 4 52 253 CAJ1937478.1 unnamed protein product [Cylindrotheca closterium] diamond 606 257 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
18756853 18756853 PRJNA929522_S_NODE_10115_length_241_cov_0.916667_g10045_i0 PRJNA929522 10115 241 0.916667 2.20916747 Fistulifera solaris 1519565 SAR_Eukaryotes SAR_Eukaryotes 144 7.07e-38   NR GAX13952.1 1519565 g10045 i0 87.2 1.94190871369295 78 10 97.1 0 237 4 251 328 GAX13952.1 citryl-CoA lyase [Fistulifera solaris] diamond 468 144 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Fistulifera Fistulifera solaris
22582425 22582425 PRJNA929522_S_NODE_1458_length_545_cov_1.957627_g1388_i0 PRJNA929522 1458 545 1.957627 10.66906715 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 281 1.63e-93   NR CAJ1953473.1 2856 g1388 i0 86.9 5.54862385321101 145 19 79.8 0 483 49 68 212 CAJ1953473.1 unnamed protein product [Cylindrotheca closterium] diamond 3024 282 0.99645390070922 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
22582449 22582449 PRJNA929522_S_NODE_4358_length_328_cov_2.007843_g4288_i0 PRJNA929522 4358 328 2.007843 6.58572504 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 164 1.9599999999999999e-47   NR GFH59352.1 426638 g4288 i0 83.1 4.07012195121951 89 15 81.4 0 60 326 67 155 GFH59352.1 hypothetical protein CTEN210_15828 [Chaetoceros tenuissimus] diamond 1335 164 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
25131490 25131490 PRJNA929522_S_NODE_460_length_890_cov_8.539780_g415_i0 PRJNA929522 460 890 8.53978 76.004042 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 416 2.76e-111   NTclustered gi|657012367|gb|KF302531.1| 2850 g415 i0 87.363 59.8955056179775 364 44 41 2 280 642 385 23 Phaeodactylum tricornutum clone C443 40S ribosomal protein mRNA, partial cds blastn 53307 416 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
25131517 25131517 PRJNA929522_S_NODE_9800_length_243_cov_0.905882_g9730_i0 PRJNA929522 9800 243 0.905882 2.20129326 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 115 1.39e-28   NR CAJ1900870.1 2856 g9730 i0 70.1 1.65432098765432 67 20 82.7 0 242 42 274 340 CAJ1900870.1 unnamed protein product [Cylindrotheca closterium] diamond 402 115 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
26644789 26644789 PRJNA929522_S_NODE_1981_length_473_cov_1.537500_g1911_i0 PRJNA929522 1981 473 1.5375 7.272375 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 117 1.99e-27   NR GFH51206.1 426638 g1911 i0 44.7 4.78858350951374 150 76 92.6 5 444 7 77 223 GFH51206.1 hypothetical protein CTEN210_07682 [Chaetoceros tenuissimus] diamond 2265 117 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
26739553 26739553 PRJNA929522_S_NODE_3061_length_382_cov_1.679612_g2991_i0 PRJNA929522 3061 382 1.679612 6.41611784 Pseudo-nitzschia multistriata 183589 SAR_Eukaryotes SAR_Eukaryotes 58.2 6.75e-8   NR VEU36651.1 183589 g2991 i0 39.3 0.43979057591623 56 34 44 0 300 133 67 122 VEU36651.1 unnamed protein product [Pseudo-nitzschia multistriata] diamond 168 58.2 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Pseudo-nitzschia Pseudo-nitzschia multistriata
26810449 26810449 PRJNA929522_S_NODE_4021_length_339_cov_1.203008_g3951_i0 PRJNA929522 4021 339 1.203008 4.07819712 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 100 3.33e-22   NR CAJ1934280.1 2856 g3951 i0 46.7 4.82300884955752 105 56 92.9 0 23 337 287 391 CAJ1934280.1 unnamed protein product [Cylindrotheca closterium] diamond 1635 100 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
27182707 27182707 PRJNA929522_S_NODE_3062_length_382_cov_1.449838_g2992_i0 PRJNA929522 3062 382 1.449838 5.53838116 Cyclostephanos tholiformis 382380 SAR_Eukaryotes SAR_Eukaryotes 95.9 2.41e-20   NR KAL3815540.1 382380 g2992 i0 40.9 4.54712041884817 115 68 90.3 0 352 8 127 241 KAL3815540.1 hypothetical protein ACHAXA_004185 [Cyclostephanos tholiformis] diamond 1737 95.9 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclostephanos Cyclostephanos tholiformis
27214356 27214356 PRJNA929522_S_NODE_9262_length_246_cov_0.890173_g9192_i0 PRJNA929522 9262 246 0.890173 2.18982558 Fragilaria crotonensis 210448 SAR_Eukaryotes SAR_Eukaryotes 68.2 3.98e-11   NR KAI2509135.1 210448 g9192 i0 51.7 1.46341463414634 60 29 73.2 0 182 3 19 78 KAI2509135.1 hypothetical protein MHU86_5254 [Fragilaria crotonensis] diamond 360 68.2 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
27253146 27253146 PRJNA929522_S_NODE_6203_length_285_cov_1.193396_g6133_i0 PRJNA929522 6203 285 1.193396 3.4011786 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 174 7.76e-53   NR KAL3782475.1 29204 g6133 i0 81.7 7.89473684210526 93 17 97.9 0 6 284 93 185 KAL3782475.1 hypothetical protein HJC23_002226 [Cyclotella cryptica] diamond 2250 175 0.994285714285714 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
27790260 27790260 PRJNA929522_S_NODE_7224_length_268_cov_1.415385_g7154_i0 PRJNA929522 7224 268 1.415385 3.7932318 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 73.9 3.25e-13   NR KAK1741567.1 267567 g7154 i0 39.6 2.02611940298507 91 50 96.3 1 2 259 199 289 KAK1741567.1 hypothetical protein QTG54_008045 [Skeletonema marinoi] diamond 543 73.9 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
28358320 28358320 PRJNA929522_S_NODE_7226_length_268_cov_1.348718_g7156_i0 PRJNA929522 7226 268 1.348718 3.61456424 Nitzschia 2857 SAR_Eukaryotes SAR_Eukaryotes 50.8 7.08e-5   NR KAG7372257.1 303405 g7156 i0 41.3 2.59701492537313 46 27 51.5 0 128 265 294 339 KAG7372257.1 RNA-binding protein [Nitzschia inconspicua] diamond 696 50.8 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
28509283 28509283 PRJNA929522_S_NODE_7227_length_268_cov_1.348718_g7157_i0 PRJNA929522 7227 268 1.348718 3.61456424 Cyclostephanos tholiformis 382380 SAR_Eukaryotes SAR_Eukaryotes 71.2 4.69e-14   NR KAL3817787.1 382380 g7157 i0 46.6 0.817164179104478 73 35 79.5 2 216 4 1 71 KAL3817787.1 hypothetical protein ACHAXA_005820 [Cyclostephanos tholiformis] diamond 219 71.2 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclostephanos Cyclostephanos tholiformis
28856389 28856389 PRJNA929522_S_NODE_6088_length_287_cov_1.799065_g6018_i0 PRJNA929522 6088 287 1.799065 5.16331655 Thalassiosira pseudonana CCMP1335 296543 SAR_Eukaryotes SAR_Eukaryotes 70.5 1.12e-11   NR XP_002286743.1 296543 g6018 i0 38.9 0.993031358885017 95 56 97.2 1 6 284 626 720 XP_002286743.1 heat shock protein belonging to the HSP70 family [Thalassiosira pseudonana CCMP1335] diamond 285 70.5 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
29148187 29148187 PRJNA929522_S_NODE_6209_length_285_cov_1.089623_g6139_i0 PRJNA929522 6209 285 1.089623 3.10542555 Bacillariophyceae 33849 SAR_Eukaryotes SAR_Eukaryotes 147 9.7e-41   NR OEU15776.1 635003 g6139 i0 66 1.97894736842105 94 32 98.9 0 2 283 253 346 OEU15776.1 putative dTDP-glucose 4,6-dehydratase [Fragilariopsis cylindrus CCMP1102] diamond 564 147 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Fragilariopsis Fragilariopsis cylindrus
29487842 29487842 PRJNA929522_S_NODE_6330_length_283_cov_1.052381_g6260_i0 PRJNA929522 6330 283 1.052381 2.97823823 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 92.4 1.71e-19   NR KAL3787257.1 29204 g6260 i0 66.2 0.784452296819788 74 24 78.4 1 59 280 156 228 KAL3787257.1 hypothetical protein HJC23_004131 [Cyclotella cryptica] diamond 222 92.4 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
29803682 29803682 PRJNA929522_S_NODE_2151_length_453_cov_1.331579_g2081_i0 PRJNA929522 2151 453 1.331579 6.03205287 Seminavis robusta 568900 SAR_Eukaryotes SAR_Eukaryotes 157 1.83e-43   NR CAB9505982.1 568900 g2081 i0 65.1 1.59602649006623 109 38 72.2 0 2 328 253 361 CAB9505982.1 oxophytodienoate reductase-like protein [Seminavis robusta] diamond 723 157 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta
30056351 30056351 PRJNA929522_S_NODE_9071_length_247_cov_1.247126_g9001_i0 PRJNA929522 9071 247 1.247126 3.08040122 Fragilaria crotonensis 210448 SAR_Eukaryotes SAR_Eukaryotes 68.9 5.92e-13   NR KAI2505161.1 210448 g9001 i0 46.8 5.30769230769231 62 33 75.3 0 245 60 42 103 KAI2505161.1 K6-linked polyubiquitin modification-dependent protein binding protein [Fragilaria crotonensis] diamond 1311 68.9 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
30246281 30246281 PRJNA929522_S_NODE_7752_length_260_cov_1.636364_g7682_i0 PRJNA929522 7752 260 1.636364 4.2545464 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 89.4 1.81e-18   NR KAG7348810.1 303405 g7682 i0 51.9 3.73846153846154 81 39 93.5 0 249 7 353 433 KAG7348810.1 multidrug ABC transporter ATPase [Nitzschia inconspicua] diamond 972 89.4 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
30498851 30498851 PRJNA929522_S_NODE_5273_length_304_cov_1.333333_g5203_i0 PRJNA929522 5273 304 1.333333 4.05333232 Thalassiosira oceanica 159749 SAR_Eukaryotes SAR_Eukaryotes 88.2 8.44e-18   NR EJK60217.1 159749 g5203 i0 46.8 3.12828947368421 79 42 78 0 278 42 419 497 EJK60217.1 hypothetical protein THAOC_19472 [Thalassiosira oceanica] diamond 951 88.2 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira oceanica
30600598 30600598 PRJNA929522_S_NODE_2773_length_401_cov_1.768293_g2703_i0 PRJNA929522 2773 401 1.768293 7.09085493 root 1 Root_unresolved Root_unresolved 149 7.81e-41   NR CAJ1937478.1 2856 g2703 i0 62.9 3.38154613466334 116 43 86.8 0 400 53 228 343 CAJ1937478.1 unnamed protein product [Cylindrotheca closterium] diamond 1356 149 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
30790254 30790254 PRJNA929522_S_NODE_8314_length_253_cov_0.822222_g8244_i0 PRJNA929522 8314 253 0.822222 2.08022166 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 68.9 3.94e-12   NR KAL3784190.1 29204 g8244 i0 53.2 2.11067193675889 62 29 73.5 0 253 68 123 184 KAL3784190.1 hypothetical protein HJC23_001389 [Cyclotella cryptica] diamond 534 68.9 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
30814746 30814746 PRJNA929522_S_NODE_4014_length_339_cov_1.560150_g3944_i0 PRJNA929522 4014 339 1.56015 5.2889085 Skeletonema marinoi 267567 SAR_Eukaryotes SAR_Eukaryotes 149 2.4999999999999993e-43   NR KAK1748306.1 267567 g3944 i0 73.7 1.68141592920354 95 25 84.1 0 55 339 8 102 KAK1748306.1 ribosomal protein L17 [Skeletonema marinoi] diamond 570 149 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
31707070 31707070 PRJNA929522_S_NODE_3357_length_366_cov_1.883959_g3287_i0 PRJNA929522 3357 366 1.883959 6.89528994 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 86.7 3.55e-18   NR KAI2494838.1 210448 g3287 i0 59.2 1.27049180327869 76 31 62.3 0 3 230 133 208 KAI2494838.1 ATP synthase delta (OSCP) subunit [Fragilaria crotonensis] diamond 465 87 0.996551724137931 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
32396114 32396114 PRJNA929522_S_NODE_3039_length_383_cov_3.345161_g2969_i0 PRJNA929522 3039 383 3.345161 12.81196663 Cyclostephanos tholiformis 382380 SAR_Eukaryotes SAR_Eukaryotes 182 3.64e-53   NR KAL3812105.1 382380 g2969 i0 69.7 2.77284595300261 119 36 93.2 0 26 382 32 150 KAL3812105.1 hypothetical protein ACHAXA_009440, partial [Cyclostephanos tholiformis] diamond 1062 182 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclostephanos Cyclostephanos tholiformis
32813206 32813206 PRJNA929522_S_NODE_2200_length_449_cov_1.007979_g2130_i0 PRJNA929522 2200 449 1.007979 4.52582571 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 82.4 4.89e-15   NR GFH49067.1 426638 g2130 i0 57.6 6.02672605790646 66 28 44.1 0 424 227 422 487 GFH49067.1 hypothetical protein CTEN210_05543 [Chaetoceros tenuissimus] diamond 2706 83.2 0.990384615384615 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
32844723 32844723 PRJNA929522_S_NODE_6100_length_287_cov_1.439252_g6030_i0 PRJNA929522 6100 287 1.439252 4.13065324 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 148 4.37e-39   NR KAL3800347.1 29204 g6030 i0 76.5 9.01045296167247 85 20 88.9 0 287 33 1052 1136 KAL3800347.1 hypothetical protein HJC23_003643 [Cyclotella cryptica] diamond 2586 148 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;