RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA929522", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA929522 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7283452 7283452 PRJNA929522_S_NODE_7626_length_262_cov_1.507937_g7556_i0 PRJNA929522 7626 262 1.507937 3.95079494 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 122 3.4599999999999996e-31   NR MBE2279803.1 2651163 g7556 i0 68.6 2.93129770992366 86 27 98.5 0 2 259 111 196 MBE2279803.1 thiolase family protein [Ignavibacteriaceae bacterium] diamond 768 122 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
28768831 28768831 PRJNA929522_S_NODE_10127_length_241_cov_0.916667_g10057_i0 PRJNA929522 10127 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 54.7 2.14e-6   NR MBX7042393.1 2053306 g10057 i0 35.5 2.81327800829876 76 41 94.6 2 3 230 416 483 MBX7042393.1 hypothetical protein [Ignavibacteria bacterium] diamond 678 54.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
31004391 31004391 PRJNA929522_S_NODE_134_length_1364_cov_6.494965_g112_i0 PRJNA929522 134 1364 6.494965 88.5913226 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 387 3.8299999999999996e-118   NR MCF8267195.1 2049428 g112 i0 45.6 0.978739002932551 445 221 95.5 9 1320 19 30 464 MCF8267195.1 T9SS type A sorting domain-containing protein [Ignavibacteriales bacterium] diamond 1335 387 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;