RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA929522", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA929522 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26810451 26810451 PRJNA929522_S_NODE_5881_length_291_cov_2.041284_g5811_i0 PRJNA929522 5881 291 2.041284 5.94013644 Bacteria 2 Bacteria Bacteria 117 2.43e-29   NR UCH62773.1 2026760 g5811 i0 60.4 10.8865979381443 96 37 99 1 289 2 161 255 UCH62773.1 MAG: fructose-bisphosphate aldolase class I [Fidelibacterota bacterium] diamond 3168 117 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28572342 28572342 PRJNA929522_S_NODE_9107_length_247_cov_0.885057_g9037_i0 PRJNA929522 9107 247 0.885057 2.18609079 Fidelibacterota bacterium 2026760 Bacteria Bacteria 60.1 2.88e-8   NR MBJ13111.1 2026760 g9037 i0 44 1.68825910931174 75 39 91.1 2 226 2 93 164 MBJ13111.1 hypothetical protein [Fidelibacterota bacterium] diamond 417 60.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31257149 31257149 PRJNA929522_S_NODE_4395_length_327_cov_1.370079_g4325_i0 PRJNA929522 4395 327 1.370079 4.48015833 Fidelibacterota bacterium 2026760 Bacteria Bacteria 100 3.669999999999999e-23   NR MCJ7802071.1 2026760 g4325 i0 53.9 0.81651376146789 89 39 79.8 2 3 263 183 271 MCJ7802071.1 lipase family protein [Fidelibacterota bacterium] diamond 267 100 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31826349 31826349 PRJNA929522_S_NODE_4857_length_314_cov_0.958506_g4787_i0 PRJNA929522 4857 314 0.958506 3.00970884 Fidelibacterota bacterium 2026760 Bacteria Bacteria 47.4 0.00133   NR MAP61335.1 2026760 g4787 i0 43.9 1.14649681528662 57 30 54.5 1 179 9 119 173 MAP61335.1 30S ribosomal protein S3 [Fidelibacterota bacterium] diamond 360 47.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;