RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA929522", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA929522 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28224856 28224856 PRJNA929522_S_NODE_666_length_771_cov_3.299427_g109_i1 PRJNA929522 666 771 3.299427 25.43858217 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 65.9 1.21e-8   NR HEY9814218.1 2364082 g109 i1 39.8 0.478599221789883 123 65 47.1 5 7 369 143 258 HEY9814218.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 369 65.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
28990242 28990242 PRJNA929522_S_NODE_6188_length_285_cov_1.731132_g6118_i0 PRJNA929522 6188 285 1.731132 4.9337262 Bacteria 2 Bacteria Bacteria 65.9 9.75e-12   NR QQR56461.1 2052166 g6118 i0 49.2 5.14736842105263 59 30 62.1 0 180 4 2 60 QQR56461.1 MAG: RNA-binding protein [Candidatus Melainabacteria bacterium] diamond 1467 65.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
29835286 29835286 PRJNA929522_S_NODE_131_length_1381_cov_5.166667_g109_i0 PRJNA929522 131 1381 5.166667 71.35167127 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 111 6.04e-24   NR HEY9814218.1 2364082 g109 i0 32.5 0.5756698044895 265 162 56 11 1176 403 4 258 HEY9814218.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 795 111 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31605168 31605168 PRJNA929522_S_NODE_4956_length_311_cov_2.743697_g4886_i0 PRJNA929522 4956 311 2.743697 8.53289767 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 55.1 2.72e-6   NR HEY9814218.1 2364082 g4886 i0 40.2 0.983922829581994 102 51 95.5 5 311 15 155 249 HEY9814218.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 306 55.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;