RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA929522", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA929522 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32238115 32238115 PRJNA929522_S_NODE_838_length_687_cov_3.247557_g777_i0 PRJNA929522 838 687 3.247557 22.31071659 Candidatus Acetothermia bacterium 2053493 Bacteria Bacteria 116 2.88e-26   NR MCI2430758.1 2053493 g777 i0 35.4 4.13100436681223 178 105 77.7 2 581 48 50 217 MCI2430758.1 S8 family serine peptidase [Candidatus Acetothermia bacterium] diamond 2838 116 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Acetothermia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;