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contig_metadata

15 rows where bioproject = "PRJNA929522" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 15 ✖

bioproject 1

  • PRJNA929522 · 15 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7283423 7283423 PRJNA929522_S_NODE_3786_length_347_cov_1.518248_g3716_i0 PRJNA929522 3786 347 1.518248 5.26832056 Thecamonas trahens 529818 Root_unresolved Root_unresolved 281 3.850000000000001e-71   NTclustered gi|923137048|ref|XM_013906535.1| 461836 g3716 i0 82.704 52.0518731988473 318 53 91 2 7 323 403 87 Thecamonas trahens ATCC 50062 Ras-like protein rasG (AMSG_01386), mRNA blastn 18062 281 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16208255 16208255 PRJNA929522_S_NODE_1193_length_593_cov_10.478846_g1127_i0 PRJNA929522 1193 593 10.478846 62.13955678 Karpovia croatica 2925417 Root_unresolved Root_unresolved 102 5.74e-17   NTclustered gi|2206682173|gb|OM966646.1| 2925417 g1127 i0 87.64 10.7571669477234 89 9 15 2 151 238 6107 6020 Karpovia croatica strain CRO19P6 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6379 102 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Karpovia Karpovia croatica
16208256 16208256 PRJNA929522_S_NODE_1253_length_582_cov_2.834971_g1186_i0 PRJNA929522 1253 582 2.834971 16.49953122 Karpovia croatica 2925417 Root_unresolved Root_unresolved 102 5.63e-17   NTclustered gi|2206682173|gb|OM966646.1| 2925417 g1186 i0 87.64 11.073883161512 89 9 15 2 151 238 6107 6020 Karpovia croatica strain CRO19P6 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6445 102 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Karpovia Karpovia croatica
20031986 20031986 PRJNA929522_S_NODE_336_length_1014_cov_6.222104_g297_i0 PRJNA929522 336 1014 6.222104 63.09213456 Thecamonas trahens 529818 Root_unresolved Root_unresolved 121 2.78e-22   NTclustered gi|923136453|ref|XM_013906238.1| 461836 g297 i0 81.818 0.209072978303748 143 26 14 0 139 281 148 290 Thecamonas trahens ATCC 50062 50S ribosomal protein L36e (AMSG_01644), partial mRNA blastn 212 121 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
22582463 22582463 PRJNA929522_S_NODE_6138_length_286_cov_1.990610_g6068_i0 PRJNA929522 6138 286 1.99061 5.6931446 Thecamonas trahens 529818 Root_unresolved Root_unresolved 132 3.3e-26   NTclustered gi|923136453|ref|XM_013906238.1| 461836 g6068 i0 85.827 0.594405594405594 127 14 44 3 44 169 265 142 Thecamonas trahens ATCC 50062 50S ribosomal protein L36e (AMSG_01644), partial mRNA blastn 170 132 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28951495 28951495 PRJNA929522_S_NODE_8288_length_253_cov_1.283333_g8218_i0 PRJNA929522 8288 253 1.283333 3.24683249 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 52.8 1.18e-5   NR XP_013754494.1 461836 g8218 i0 33.8 0.877470355731225 74 47 85.4 1 251 36 70 143 XP_013754494.1 uncharacterized protein AMSG_12218 [Thecamonas trahens ATCC 50062] diamond 222 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29172456 29172456 PRJNA929522_S_NODE_2989_length_386_cov_1.460064_g2919_i0 PRJNA929522 2989 386 1.460064 5.63584704 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 101 8.199999999999999e-24   NR XP_013759815.1 461836 g2919 i0 45.2 2.62694300518135 115 63 89.4 0 353 9 6 120 XP_013759815.1 calcineurin B [Thecamonas trahens ATCC 50062] diamond 1014 101 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29961701 29961701 PRJNA929522_S_NODE_3771_length_347_cov_3.766423_g3701_i0 PRJNA929522 3771 347 3.766423 13.06948781 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 103 2.11e-24   NR XP_013761184.1 461836 g3701 i0 51.9 2.835734870317 108 50 92.5 2 323 3 141 247 XP_013761184.1 sterol-binding domain-containing protein [Thecamonas trahens ATCC 50062] diamond 984 103 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30119539 30119539 PRJNA929522_S_NODE_8912_length_248_cov_1.320000_g8842_i0 PRJNA929522 8912 248 1.32 3.2736 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 43.5 0.0209   NR XP_013758281.1 461836 g8842 i0 23.5 0.979838709677419 81 62 98 0 1 243 79 159 XP_013758281.1 uncharacterized protein AMSG_04606 [Thecamonas trahens ATCC 50062] diamond 243 43.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30941367 30941367 PRJNA929522_S_NODE_754_length_721_cov_8.390432_g450_i1 PRJNA929522 754 721 8.390432 60.49501472 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 196 8.76e-59   NR XP_013762487.1 461836 g450 i1 46 0.986130374479889 237 113 98.2 5 710 3 9 231 XP_013762487.1 countin-1 [Thecamonas trahens ATCC 50062] diamond 711 196 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31327471 31327471 PRJNA929522_S_NODE_2915_length_392_cov_0.965517_g2845_i0 PRJNA929522 2915 392 0.965517 3.78482664 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 162 9.51e-45   NR XP_013762089.1 461836 g2845 i0 60.3 5.8469387755102 126 50 96.4 0 14 391 121 246 XP_013762089.1 inositol-3-phosphate synthase [Thecamonas trahens ATCC 50062] diamond 2292 162 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31383817 31383817 PRJNA929522_S_NODE_1996_length_472_cov_1.192982_g1926_i0 PRJNA929522 1996 472 1.192982 5.63087504 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 139 1.17e-37   NR XP_013761332.1 461836 g1926 i0 48.9 0.896186440677966 141 68 87.1 2 446 36 116 256 XP_013761332.1 cytochrome B561 [Thecamonas trahens ATCC 50062] diamond 423 139 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31383819 31383819 PRJNA929522_S_NODE_496_length_863_cov_11.150633_g450_i0 PRJNA929522 496 863 11.150633 96.22996279 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 193 3.5399999999999997e-57   NR XP_013762487.1 461836 g450 i0 45.1 4.00463499420626 237 115 82 5 852 145 9 231 XP_013762487.1 countin-1 [Thecamonas trahens ATCC 50062] diamond 3456 193 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31700005 31700005 PRJNA929522_S_NODE_3617_length_354_cov_1.366548_g3547_i0 PRJNA929522 3617 354 1.366548 4.83757992 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 93.2 2.58e-19   NR XP_013761624.1 461836 g3547 i0 43.9 0.906779661016949 107 56 90.7 3 327 7 16 118 XP_013761624.1 cAMP-regulated D2 protein [Thecamonas trahens ATCC 50062] diamond 321 93.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32774576 32774576 PRJNA929522_S_NODE_3420_length_363_cov_1.327586_g3350_i0 PRJNA929522 3420 363 1.327586 4.81913718 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 63.5 7.68e-9   NR XP_013756049.1 461836 g3350 i0 35.2 1.00826446280992 122 74 97.5 3 3 356 339 459 XP_013756049.1 NAD-specific glutamate dehydrogenase [Thecamonas trahens ATCC 50062] diamond 366 63.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;