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contig_metadata

12 rows where bioproject = "PRJNA928559" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA928559 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
903620 903620 PRJNA928559_P_NODE_219001_length_235_cov_5.450617_g217432_i0 PRJNA928559 219001 235 5.450617 12.80894995 uncultured Mollicutes bacterium 220137 Bacteria Bacteria 95.3 3.45e-15   NTclustered gi|2187163481|emb|OV788639.1| 220137 g217432 i0 80.159 18.2510638297872 126 25 54 0 35 160 1372772 1372647 uncultured Mollicutes bacterium isolate min17_bin64 genome assembly, chromosome: 1 blastn 4289 95.3 1 Bacteria   Bacillati Mycoplasmatota Mollicutes       uncultured Mollicutes bacterium
6356876 6356876 PRJNA928559_P_NODE_175865_length_262_cov_9.523810_g174296_i0 PRJNA928559 175865 262 9.52381 24.9523822 root 1 Root_unresolved Root_unresolved 65.8 3.07e-6   NTclustered gi|1851159111|gb|CP054256.1| 2102 g174296 i0 91.667 16.4427480916031 48 3 18 1 1 47 1126127 1126174 Mycoplasma mycoides strain T1/44 GP chromosome, complete genome blastn 4308 65.8 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma mycoides
8905734 8905734 PRJNA928559_P_NODE_202527_length_247_cov_0.896552_g200958_i0 PRJNA928559 202527 247 0.896552 2.21448344 Mesomycoplasma 2923352 Bacteria Bacteria 457 4.05e-124   NTclustered gi|1720621726|gb|CP035041.1| 2100 g200958 i0 100 15 247 0 100 0 1 247 270777 270531 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 3705 457 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
16205356 16205356 PRJNA928559_P_NODE_134953_length_305_cov_1.883621_g133384_i0 PRJNA928559 134953 305 1.883621 5.74504405 Mycoplasma iguanae 292461 Bacteria Bacteria 54.7 0.008   NTclustered gi|2288165161|gb|CP102734.1| 292461 g133384 i0 100 0.095081967213114807 29 0 10 0 31 59 38551 38579 Mycoplasma iguanae strain 2327 chromosome, complete genome blastn 29 54.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma iguanae
16206578 16206578 PRJNA928559_P_NODE_219173_length_235_cov_2.851852_g217604_i0 PRJNA928559 219173 235 2.851852 6.7018522 Metamycoplasma alkalescens 45363 Bacteria Bacteria 52.8 0.021   NTclustered gi|1450418660|emb|LS991949.1| 45363 g217604 i0 100 0.119148936170213 28 0 12 0 1 28 139247 139220 Mycoplasma alkalescens strain NCTC10135 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Metamycoplasma Metamycoplasma alkalescens
19104353 19104353 PRJNA928559_P_NODE_202335_length_247_cov_0.896552_g200766_i0 PRJNA928559 202335 247 0.896552 2.21448344 Mesomycoplasma 2923352 Bacteria Bacteria 457 4.05e-124   NTclustered gi|1720621726|gb|CP035041.1| 2100 g200766 i0 100 15.9919028340081 247 0 100 0 1 247 776978 776732 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 3950 457 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
22930369 22930369 PRJNA928559_P_NODE_108998_length_341_cov_4.126866_g107429_i0 PRJNA928559 108998 341 4.126866 14.07261306 root 1 Root_unresolved Root_unresolved 115 4.0500000000000005e-21   NTclustered gi|549142279|emb|FO681348.1| 61635 g107429 i0 77.404 49.7008797653959 208 37 60 7 13 215 333149 332947 complete chromosome Acholeplasma brassicae blastn 16948 115 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Acholeplasma Acholeplasma brassicae
22930720 22930720 PRJNA928559_P_NODE_206838_length_245_cov_0.906977_g205269_i0 PRJNA928559 206838 245 0.906977 2.22209365 Mesomycoplasma 2923352 Bacteria Bacteria 453 5.1900000000000006e-123   NTclustered gi|1720621726|gb|CP035041.1| 2100 g205269 i0 100 21.6285714285714 245 0 100 0 1 245 790890 790646 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 5299 453 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
25130575 25130575 PRJNA928559_P_NODE_77720_length_401_cov_3.786585_g76151_i0 PRJNA928559 77720 401 3.786585 15.18420585 Spiroplasma endosymbiont of Drosophila atripex 614643 Bacteria Bacteria 52.8 0.038   NTclustered gi|2444111447|gb|CP117528.1| 614643 g76151 i0 100 0.349127182044888 28 0 7 0 367 394 185810 185837 MAG: Spiroplasma endosymbiont of Drosophila atripex isolate sAtri chromosome, complete genome blastn 140 52.8 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma endosymbiont of Drosophila atripex
26707973 26707973 PRJNA928559_P_NODE_219741_length_234_cov_2.664596_g218172_i0 PRJNA928559 219741 234 2.664596 6.23515464 Acholeplasmatales bacterium 2053494 Bacteria Bacteria 56.2 3.05e-7   NR MBQ9899564.1 2053494 g218172 i0 54.5 1.67948717948718 44 20 56.4 0 234 103 169 212 MBQ9899564.1 adenylate kinase [Acholeplasmatales bacterium] diamond 393 56.2 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales     Acholeplasmatales bacterium
26961340 26961340 PRJNA928559_P_NODE_193062_length_251_cov_0.876404_g191493_i0 PRJNA928559 193062 251 0.876404 2.19977404 Acholeplasma sp. 33015 Bacteria Bacteria 42.7 0.0414   NR MDY0347116.1 33015 g191493 i0 32.9 0.872509960159363 73 48 86.1 1 18 233 675 747 MDY0347116.1 FtsX-like permease family protein [Acholeplasma sp.] diamond 219 42.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Acholeplasma Acholeplasma sp.
27253121 27253121 PRJNA928559_P_NODE_125403_length_317_cov_3.651639_g123834_i0 PRJNA928559 125403 317 3.651639 11.57569563 Bacteria 2 Bacteria Bacteria 44.3 0.024   NR MCI7068902.1 37628 g123834 i0 33.8 1.38170347003155 74 45 66.2 1 44 253 105 178 MCI7068902.1 GHKL domain-containing protein [Mollicutes bacterium] diamond 438 44.3 1 Bacteria   Bacillati Mycoplasmatota Mollicutes       Mollicutes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;