RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA928559", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA928559 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4732281 4732281 PRJNA928559_P_NODE_2904_length_1703_cov_6.359509_g2362_i0 PRJNA928559 2904 1703 6.359509 108.30243827 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 573 7.649999999999999e-185   NR HXA84426.1 2052315 g2362 i0 57.3 0.919553728714034 522 217 90.9 2 155 1702 47 568 HXA84426.1 amino acid adenylation domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 1566 573 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
28698818 28698818 PRJNA928559_P_NODE_201987_length_247_cov_0.896552_g200418_i0 PRJNA928559 201987 247 0.896552 2.21448344 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 94 1.52e-20   NR HSU55183.1 2052315 g200418 i0 61.8 7.28744939271255 76 29 92.3 0 20 247 7 82 HSU55183.1 2-methylcitrate synthase [Candidatus Dormiibacterota bacterium] diamond 1800 94 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;