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contig_metadata

16 rows where bioproject = "PRJNA928559", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 16 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 16 ✖

bioproject 1

  • PRJNA928559 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
904012 904012 PRJNA928559_P_NODE_39441_length_532_cov_5347.211329_g37886_i0 PRJNA928559 39441 532 5347.211329 28447.16427028 uncultured Methanoregula sp. 1005933 Archaea Archaea 730 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g37886 i0 93.227 284.716165413534 502 25 94 9 1 498 3114894 3114398 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 151469 730 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
2178414 2178414 PRJNA928559_P_NODE_183162_length_256_cov_2.513661_g181593_i0 PRJNA928559 183162 256 2.513661 6.43497216 uncultured Methanoregula sp. 1005933 Archaea Archaea 390 4.3399999999999997e-104   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g181593 i0 94.141 112.66796875 256 15 100 0 1 256 3089861 3090116 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 28843 390 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
2528566 2528566 PRJNA928559_P_NODE_188402_length_253_cov_0.866667_g186833_i0 PRJNA928559 188402 253 0.866667 2.19266751 root 1 Root_unresolved Root_unresolved 52.8 0.023   NTclustered gi|2224381021|gb|CP095390.1| 1419050 g186833 i0 100 0.553359683794466 28 0 11 0 75 102 1418096 1418123 Natribaculum breve strain TRM20010 chromosome, complete genome blastn 140 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natribaculum Natribaculum breve
4732477 4732477 PRJNA928559_P_NODE_42584_length_516_cov_21317.155756_g41026_i0 PRJNA928559 42584 516 21317.155756 109996.52370096 uncultured Methanoregula sp. 1005933 Archaea Archaea 937 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g41026 i0 99.419 309.87015503876 516 3 100 0 1 516 3117554 3117039 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 159893 937 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
7282277 7282277 PRJNA928559_P_NODE_5946_length_1222_cov_4.832898_g5046_i0 PRJNA928559 5946 1222 4.832898 59.05801356 uncultured Methanoregula sp. 1005933 Archaea Archaea 1194 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g5046 i0 84.653 44.6039279869067 1238 147 99 22 1 1210 3123961 3122739 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 54506 1194 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
9831104 9831104 PRJNA928559_P_NODE_199888_length_248_cov_0.891429_g198319_i0 PRJNA928559 199888 248 0.891429 2.21074392 Methanothrix soehngenii 2223 Archaea Archaea 381 2.519999999999999e-101   NTclustered gi|328927127|gb|CP002565.1| 990316 g198319 i0 100 45.6693548387097 206 0 100 0 43 248 838476 838271 Methanosaeta concilii GP-6, complete genome blastn 11326 381 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
16205961 16205961 PRJNA928559_P_NODE_175593_length_263_cov_1.415789_g174024_i0 PRJNA928559 175593 263 1.415789 3.72352507 Halorubrum sp. 2020YC2 2836432 Archaea Archaea 52.8 0.024   NTclustered gi|2047351610|gb|CP076019.1| 2836432 g174024 i0 100 0.106463878326996 28 0 11 0 32 59 1404453 1404426 Halorubrum sp. 2020YC2 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. 2020YC2
23855492 23855492 PRJNA928559_P_NODE_192679_length_251_cov_0.876404_g191110_i0 PRJNA928559 192679 251 0.876404 2.19977404 Halosimplex aquaticum 3026162 Archaea Archaea 52.8 0.023   NTclustered gi|2446562038|gb|CP118158.1| 3026162 g191110 i0 96.774 0.123505976095618 31 1 12 0 189 219 1866552 1866582 Halosimplex aquaticum strain XZYJT29 chromosome, complete genome blastn 31 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex aquaticum
25130275 25130275 PRJNA928559_P_NODE_52280_length_475_cov_9.927861_g50714_i0 PRJNA928559 52280 475 9.927861 47.15733975 uncultured Methanoregula sp. 1005933 Archaea Archaea 717 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g50714 i0 94.433 91.2168421052632 467 25 98 1 9 474 3123729 3124195 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 43328 717 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
25479515 25479515 PRJNA928559_P_NODE_204900_length_246_cov_0.901734_g203331_i0 PRJNA928559 204900 246 0.901734 2.21826564 Halobacteriales 2235 Archaea Archaea 449 6.74e-122   NTclustered gi|1675275423|gb|MN000441.1| 2243 g203331 i0 99.593 100 246 1 100 0 1 246 678 433 Halobacterium sp. strain PTA096 16S ribosomal RNA gene, partial sequence blastn 24600 449 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium sp.
27821901 27821901 PRJNA928559_P_NODE_4384_length_1414_cov_4.498136_g3634_i0 PRJNA928559 4384 1414 4.498136 63.60364304 root 1 Root_unresolved Root_unresolved 123 4.41e-29   NR HET8689243.1 2213 g3634 i0 65.9 0.386138613861386 88 29 18.7 1 1149 1412 18 104 HET8689243.1 hypothetical protein [Methanosarcina sp.] diamond 546 124 0.991935483870968 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
28667167 28667167 PRJNA928559_P_NODE_144547_length_294_cov_0.814480_g142978_i0 PRJNA928559 144547 294 0.81448 2.3945712 Haloferax volcanii 2246 Archaea Archaea 45.1 0.00344   NR WP_144859680.1 2246 g142978 i0 43.8 0.979591836734694 48 23 49 1 61 204 17 60 WP_144859680.1 aminotransferase class V-fold PLP-dependent enzyme, partial [Haloferax volcanii] diamond 288 45.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax volcanii
29747433 29747433 PRJNA928559_P_NODE_87150_length_381_cov_1.545455_g85581_i0 PRJNA928559 87150 381 1.545455 5.88818355 root 1 Root_unresolved Root_unresolved 141 3.35e-39   NR WP_011450032.1 2203 g85581 i0 56.7 2.01574803149606 127 45 100 2 1 381 62 178 WP_011450032.1 pseudaminic acid cytidylyltransferase [Methanospirillum hungatei] diamond 768 141 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum hungatei
31383730 31383730 PRJNA928559_P_NODE_161336_length_276_cov_1.807882_g159767_i0 PRJNA928559 161336 276 1.807882 4.98975432 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 47 0.00173   NR MDD4281430.1 2099674 g159767 i0 38 1.80434782608696 79 37 85.9 3 268 32 449 515 MDD4281430.1 tetratricopeptide repeat protein [Candidatus Methanofastidiosia archaeon] diamond 498 47 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
31605065 31605065 PRJNA928559_P_NODE_119436_length_326_cov_1.320158_g117867_i0 PRJNA928559 119436 326 1.320158 4.30371508 Halonotius pteroides 268735 Archaea Archaea 59.3 1.58e-7   NR WP_133305096.1 268735 g117867 i0 45.5 1.69325153374233 112 52 99.4 5 3 326 920 1026 WP_133305096.1 GLUG motif-containing protein [Halonotius pteroides] diamond 552 59.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halonotius Halonotius pteroides
31675324 31675324 PRJNA928559_P_NODE_149217_length_288_cov_3.139535_g147648_i0 PRJNA928559 149217 288 3.139535 9.0418608 root 1 Root_unresolved Root_unresolved 110 3.58e-27   NR HET8689265.1 2213 g147648 i0 60 7.91666666666667 95 38 99 0 286 2 12 106 HET8689265.1 hypothetical protein [Methanosarcina sp.] diamond 2280 111 0.990990990990991 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;