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contig_metadata

9 rows where bioproject = "PRJNA928559", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA928559 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27316634 27316634 PRJNA928559_P_NODE_154183_length_283_cov_2.495238_g152614_i0 PRJNA928559 154183 283 2.495238 7.06152354 root 1 Root_unresolved Root_unresolved 152 1.77e-42   NR ETO21972.1 46433 g152614 i0 80.6 33.5194346289753 93 18 98.6 0 281 3 13 105 ETO21972.1 hypothetical protein RFI_15231 [Reticulomyxa filosa] diamond 9486 152 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28098604 28098604 PRJNA928559_P_NODE_143485_length_295_cov_1.405405_g141916_i0 PRJNA928559 143485 295 1.405405 4.14594475 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 116 1.05e-27   NR ETO25163.1 46433 g141916 i0 54.7 1.93220338983051 95 42 96.6 1 9 293 220 313 ETO25163.1 ubiquitin protein ligase [Reticulomyxa filosa] diamond 570 116 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28667190 28667190 PRJNA928559_P_NODE_183487_length_256_cov_1.704918_g181918_i0 PRJNA928559 183487 256 1.704918 4.36459008 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 63.2 2.58e-9   NR ETO15753.1 46433 g181918 i0 50.8 0.69140625 59 29 69.1 0 179 3 129 187 ETO15753.1 hypothetical protein RFI_21613, partial [Reticulomyxa filosa] diamond 177 63.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29235450 29235450 PRJNA928559_P_NODE_165969_length_272_cov_1.145729_g164400_i0 PRJNA928559 165969 272 1.145729 3.11638288 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 119 2.0099999999999997e-30   NR ETO27333.1 46433 g164400 i0 61.4 1.81985294117647 83 32 91.5 0 271 23 134 216 ETO27333.1 SET domain containing protein [Reticulomyxa filosa] diamond 495 119 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30087900 30087900 PRJNA928559_P_NODE_147212_length_291_cov_1.055046_g145643_i0 PRJNA928559 147212 291 1.055046 3.07018386 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 53.9 7.73e-6   NR ETO28518.1 46433 g145643 i0 39.7 0.701030927835051 68 33 70.1 1 206 3 590 649 ETO28518.1 axonemal dynein gamma heavy chain [Reticulomyxa filosa] diamond 204 53.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31161978 31161978 PRJNA928559_P_NODE_197655_length_249_cov_0.886364_g196086_i0 PRJNA928559 197655 249 0.886364 2.20704636 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 56.6 5.19e-7   NR ETO14536.1 46433 g196086 i0 42.9 0.843373493975904 70 38 84.3 2 244 35 253 320 ETO14536.1 hypothetical protein RFI_22832, partial [Reticulomyxa filosa] diamond 210 56.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31169193 31169193 PRJNA928559_P_NODE_219455_length_235_cov_2.012346_g217886_i0 PRJNA928559 219455 235 2.012346 4.7290131 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 95.5 9.59e-22   NR ETO01022.1 46433 g217886 i0 58.9 4.77446808510638 73 30 93.2 0 235 17 131 203 ETO01022.1 protein-transport Sec61 protein subunit alpha, partial [Reticulomyxa filosa] diamond 1122 95.5 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31200572 31200572 PRJNA928559_P_NODE_204075_length_246_cov_1.352601_g202506_i0 PRJNA928559 204075 246 1.352601 3.32739846 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 92.8 8.65e-20   NR ETO05878.1 46433 g202506 i0 57.7 1.9390243902439 78 25 95.1 1 242 9 315 384 ETO05878.1 ubiquitin activating enzyme 2 [Reticulomyxa filosa] diamond 477 92.8 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32111255 32111255 PRJNA928559_P_NODE_209738_length_244_cov_0.912281_g208169_i0 PRJNA928559 209738 244 0.912281 2.22596564 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 88.2 3.72e-18   NR ETO24530.1 46433 g208169 i0 60 1.95491803278689 80 32 98.4 0 241 2 215 294 ETO24530.1 protein kinase, cAMP-dependent, catalytic chain [Reticulomyxa filosa] diamond 477 88.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;