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contig_metadata

12 rows where bioproject = "PRJNA928559", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 12 ✖

tax_clade 1

  • Metamonada · 12 ✖

bioproject 1

  • PRJNA928559 · 12 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27600864 27600864 PRJNA928559_P_NODE_125904_length_317_cov_1.278689_g124335_i0 PRJNA928559 125904 317 1.278689 4.05344413 root 1 Root_unresolved Root_unresolved 61.2 2.88e-8   NR TNJ26324.1 5742 g124335 i0 46.6 5.62145110410095 58 31 54.9 0 246 73 83 140 TNJ26324.1 Glycogen phosphorylase [Giardia muris] diamond 1782 61.6 0.993506493506494 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
28548131 28548131 PRJNA928559_P_NODE_140647_length_298_cov_2.000000_g139078_i0 PRJNA928559 140647 298 2 5.96 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.6 0.00315   NR XP_001708419.2 5741 g139078 i0 45.3 4.42953020134228 75 33 68.5 3 5 208 407 480 XP_001708419.2 High cysteine membrane protein Group 6 [Giardia intestinalis] diamond 1320 46.6 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
28919428 28919428 PRJNA928559_P_NODE_144488_length_294_cov_1.058824_g142919_i0 PRJNA928559 144488 294 1.058824 3.11294256 Giardia intestinalis 5741 Fornicata other_Eukaryota 53.5 1.1e-5   NR ESU42289.1 5741 g142919 i0 39.8 3.22448979591837 108 51 96.9 5 290 6 77 183 ESU42289.1 Variant-specific surface protein [Giardia intestinalis] diamond 948 53.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
29495128 29495128 PRJNA928559_P_NODE_180570_length_258_cov_3.643243_g179001_i0 PRJNA928559 180570 258 3.643243 9.39956694 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 6.29e-26   NR TNJ28992.1 5742 g179001 i0 64 14.546511627907 75 27 87.2 0 241 17 8 82 TNJ28992.1 RNase L inhibitor [Giardia muris] diamond 3753 111 0.990990990990991 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
29582366 29582366 PRJNA928559_P_NODE_206610_length_245_cov_1.162791_g205041_i0 PRJNA928559 206610 245 1.162791 2.84883795 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 62.8 3.36e-9   NR KAG9394971.1 201153 g205041 i0 56.5 0.563265306122449 46 20 56.3 0 138 1 99 144 KAG9394971.1 DNA topoisomerase 3 beta [Carpediemonas membranifera] diamond 138 62.8 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
30719818 30719818 PRJNA928559_P_NODE_134754_length_305_cov_2.525862_g133185_i0 PRJNA928559 134754 305 2.525862 7.7038791 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 90.5 1.34e-18   NR GKT35572.1 2918883 g133185 i0 58.8 5.80327868852459 68 27 65.9 1 104 304 386 453 GKT35572.1 Isoleucine--tRNA ligase, cytoplasmic [Aduncisulcus paluster] diamond 1770 90.5 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
30751557 30751557 PRJNA928559_P_NODE_128054_length_314_cov_1.489627_g126485_i0 PRJNA928559 128054 314 1.489627 4.67742878 Kipferlia bialata 797122 Fornicata other_Eukaryota 66.6 3.65e-10   NR GIQ80742.1 797122 g126485 i0 41 0.745222929936306 78 46 74.5 0 65 298 938 1015 GIQ80742.1 dynein heavy chain [Kipferlia bialata] diamond 234 66.6 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
30814677 30814677 PRJNA928559_P_NODE_192054_length_251_cov_1.494382_g190485_i0 PRJNA928559 192054 251 1.494382 3.75089882 Giardia intestinalis 5741 Fornicata other_Eukaryota 44.3 0.00806   NR ESU37843.1 5741 g190485 i0 37 2.199203187251 46 26 55 1 217 80 68 110 ESU37843.1 Variant-specific surface protein, partial [Giardia intestinalis] diamond 552 44.3 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
30853438 30853438 PRJNA928559_P_NODE_204054_length_246_cov_1.381503_g202485_i0 PRJNA928559 204054 246 1.381503 3.39849738 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 132 6.23e-34   NR KAG9389646.1 201153 g202485 i0 71.8 2.8780487804878 78 22 95.1 0 244 11 427 504 KAG9389646.1 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit [Carpediemonas membranifera] diamond 708 133 0.992481203007519 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
31707050 31707050 PRJNA928559_P_NODE_115477_length_332_cov_0.980695_g113908_i0 PRJNA928559 115477 332 0.980695 3.2559074 root 1 Root_unresolved Root_unresolved 113 2.49e-27   NR CAK8773861.1 28002 g113908 i0 50.5 14.9548192771084 109 53 97.6 1 1 324 191 299 CAK8773861.1 HINF_055388 [Hexamita inflata] diamond 4965 114 0.991228070175439 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
31763102 31763102 PRJNA928559_P_NODE_129857_length_311_cov_5.252101_g128288_i0 PRJNA928559 129857 311 5.252101 16.33403411 Hexamita inflata 28002 Fornicata other_Eukaryota 81.3 1.66e-15   NR CAK8746233.1 28002 g128288 i0 41.1 1.83279742765273 95 56 91.6 0 286 2 1 95 CAK8746233.1 HINF_020048 [Hexamita inflata] diamond 570 81.3 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
31833400 31833400 PRJNA928559_P_NODE_149377_length_288_cov_2.213953_g147808_i0 PRJNA928559 149377 288 2.213953 6.37618464 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 45.1 0.00955   NR XP_001708033.1 5741 g147808 i0 34.7 1.80208333333333 95 44 87.5 2 260 9 303 390 XP_001708033.1 VSP [Giardia intestinalis] diamond 519 45.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;