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contig_metadata

9 rows where bioproject = "PRJNA928559", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 9 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 9 ✖

bioproject 1

  • PRJNA928559 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8905460 8905460 PRJNA928559_P_NODE_131367_length_309_cov_17.538136_g129798_i0 PRJNA928559 131367 309 17.538136 54.19284024 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 107 8.85e-28   NR HEY4756079.1 2651163 g129798 i0 63.6 0.640776699029126 66 24 64.1 0 4 201 39 104 HEY4756079.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 198 107 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
13657299 13657299 PRJNA928559_P_NODE_220331_length_233_cov_2.537500_g218762_i0 PRJNA928559 220331 233 2.5375 5.912375 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 114 5.1e-30   NR HEY6435027.1 2651163 g218762 i0 91.8 0.785407725321888 61 5 78.5 0 188 6 91 151 HEY6435027.1 uridine monophosphate kinase [Ignavibacteriaceae bacterium] diamond 183 114 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
25128297 25128297 PRJNA928559_P_NODE_122280_length_322_cov_1.269076_g120711_i0 PRJNA928559 122280 322 1.269076 4.08642472 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 144 1.7699999999999993e-41   NR HEY6435027.1 2651163 g120711 i0 92 1.39751552795031 75 6 69.9 0 245 21 5 79 HEY6435027.1 uridine monophosphate kinase [Ignavibacteriaceae bacterium] diamond 450 144 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
26898375 26898375 PRJNA928559_P_NODE_218801_length_236_cov_2.368098_g217232_i0 PRJNA928559 218801 236 2.368098 5.58871128 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 42.4 0.0463   NR MEI9971825.1 2026749 g217232 i0 66.7 0.38135593220339 30 10 38.1 0 234 145 510 539 MEI9971825.1 chaperonin GroEL [Ignavibacteriota bacterium] diamond 90 42.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
27845973 27845973 PRJNA928559_P_NODE_179744_length_259_cov_2.096774_g178175_i0 PRJNA928559 179744 259 2.096774 5.43064466 Ignavibacteria bacterium 2053306 Bacteria Bacteria 159 1.4899999999999999e-46   NR MDP2364821.1 2053306 g178175 i0 94 2.93050193050193 84 5 97.3 0 6 257 1 84 MDP2364821.1 N-acetyl-gamma-glutamyl-phosphate reductase [Ignavibacteria bacterium] diamond 759 159 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
28737388 28737388 PRJNA928559_P_NODE_18367_length_736_cov_2.022624_g16925_i0 PRJNA928559 18367 736 2.022624 14.88651264 Pseudomonadati 3379134 Bacteria Bacteria 243 7.3999999999999995e-75   NR MCE2755913.1 2026749 g16925 i0 70.9 15.4402173913043 165 48 67.3 0 496 2 184 348 MCE2755913.1 4-hydroxybutyrate CoA-transferase [Ignavibacteriota bacterium] diamond 11364 245 0.991836734693878 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
29803603 29803603 PRJNA928559_P_NODE_173411_length_265_cov_1.239583_g171842_i0 PRJNA928559 173411 265 1.239583 3.28489495 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 69.7 1.38e-11   NR HOJ18203.1 2651163 g171842 i0 48.1 1.83396226415094 81 40 90.6 2 19 258 256 335 HOJ18203.1 serine hydrolase domain-containing protein [Ignavibacteriaceae bacterium] diamond 486 69.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
30341327 30341327 PRJNA928559_P_NODE_227072_length_203_cov_4.138462_g225503_i0 PRJNA928559 227072 203 4.138462 8.40107786 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 96.3 5.59e-22   NR MBI5403568.1 2026749 g225503 i0 65.7 0.990147783251232 67 23 99 0 203 3 173 239 MBI5403568.1 class I SAM-dependent methyltransferase [Ignavibacteriota bacterium] diamond 201 96.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
30372806 30372806 PRJNA928559_P_NODE_6852_length_1149_cov_12.467472_g5868_i0 PRJNA928559 6852 1149 12.467472 143.25125328 Ignavibacteria bacterium 2053306 Bacteria Bacteria 531 5.2e-188   NR MDP3443447.1 2053306 g5868 i0 93.7 0.741514360313316 284 18 74.2 0 251 1102 1 284 MDP3443447.1 TIGR04219 family outer membrane beta-barrel protein [Ignavibacteria bacterium] diamond 852 531 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;