RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA928559", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA928559 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14930005 14930005 PRJNA928559_P_NODE_11372_length_914_cov_5.294887_g10126_i0 PRJNA928559 11372 914 5.294887 48.39526718 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 1035 0   NTclustered gi|2621703255|emb|OY762428.1| 2447898 g10126 i0 87.149 434.754923413567 926 101 100 14 1 914 2679790 2680709 MAG: Candidatus Kapabacteria bacterium isolate a44c304e-2480-4604-92e3-6035b9b042d9 genome assembly, chromosome: 1 blastn 397366 1035 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
28256408 28256408 PRJNA928559_P_NODE_190506_length_252_cov_0.871508_g188937_i0 PRJNA928559 190506 252 0.871508 2.19620016 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 100 1.95e-22   NR TAE27497.1 2447898 g188937 i0 67.6 0.80952380952381 68 22 81 0 206 3 50 117 TAE27497.1 MAG: hypothetical protein EAZ92_09265 [Candidatus Kapaibacterium sp.] diamond 204 100 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
28446140 28446140 PRJNA928559_P_NODE_171286_length_267_cov_1.304124_g169717_i0 PRJNA928559 171286 267 1.304124 3.48201108 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 99.8 2.05e-24   NR MCU0424938.1 2447898 g169717 i0 56.3 0.97752808988764 87 38 97.8 0 266 6 38 124 MCU0424938.1 transposase [Candidatus Kapaibacterium sp.] diamond 261 99.8 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;