RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA928559", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA928559 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26644761 26644761 PRJNA928559_P_NODE_66301_length_430_cov_3.980392_g64732_i0 PRJNA928559 66301 430 3.980392 17.1156856 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 62.4 4.03e-8   NR MBN2310074.1 2030809 g64732 i0 39.6 0.704651162790698 101 55 69.1 4 16 312 33 129 MBN2310074.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 303 62.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29526772 29526772 PRJNA928559_P_NODE_209650_length_244_cov_0.912281_g208081_i0 PRJNA928559 209650 244 0.912281 2.22596564 Pseudomonadati 3379134 Bacteria Bacteria 43.5 0.00336   NR MCL4219359.1 2030809 g208081 i0 51.4 2.27459016393443 37 18 45.5 0 3 113 13 49 MCL4219359.1 ankyrin repeat domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 555 43.5 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;