RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA928559", tax_clade = "Candidatus Thermofonsia Clade 3" and tax_kingdom = "Bacillati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bacillati · 3 ✖

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 3 ✖

bioproject 1

  • PRJNA928559 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9830154 9830154 PRJNA928559_P_NODE_135548_length_304_cov_2.580087_g133979_i0 PRJNA928559 135548 304 2.580087 7.84346448 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 348 3.23e-91   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g133979 i0 87.879 14.1381578947368 297 35 98 1 3 299 3495597 3495892 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 4298 348 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
11106551 11106551 PRJNA928559_P_NODE_177029_length_261_cov_5.000000_g175460_i0 PRJNA928559 177029 261 5 13.05 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 248 2.8299999999999997e-61   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g175460 i0 84.328 156.92337164751 268 27 97 10 8 260 3494414 3494681 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 40957 248 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
14931892 14931892 PRJNA928559_P_NODE_36252_length_551_cov_2.403766_g34702_i0 PRJNA928559 36252 551 2.403766 13.24475066 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 640 9.099999999999998e-179   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g34702 i0 87.862 860.662431941924 552 57 99 9 7 551 3495396 3494848 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 474225 640 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;