RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA927284" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA927284 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9829607 9829607 PRJNA927284_P_NODE_1328_length_650_cov_3.607085_g1180_i0 PRJNA927284 1328 650 3.607085 23.4460525 Pithovirus LCPAC102 2506587 Viruses Viruses 73.1 4.96e-8   NTclustered gi|1588063743|gb|MK500471.1| 2506587 g1180 i0 97.619 0.250769230769231 42 1 6 0 519 560 12795 12836 MAG: Pithovirus LCPAC102 genomic sequence blastn 163 73.1 1 Viruses Pithoviruses             Pithovirus LCPAC102
28603882 28603882 PRJNA927284_P_NODE_5867_length_225_cov_2.086735_g5660_i0 PRJNA927284 5867 225 2.086735 4.69515375 Hubei picorna-like virus 6 1923142 Viruses Viruses 93.2 5.12e-20   NR YP_009337395.1 1923143 g5660 i0 84.5 0.773333333333333 58 9 77.3 0 5 178 2999 3056 YP_009337395.1 hypothetical protein [Hubei picorna-like virus 60] diamond 174 93.2 1 Viruses               Hubei picorna-like virus 60
30277891 30277891 PRJNA927284_P_NODE_612_length_1012_cov_9.138352_g512_i0 PRJNA927284 612 1012 9.138352 92.48012224 Parvovirus marine5623s3 3117132 Viruses Viruses 111 5.26e-24   NR DBA45660.1 3117132 g512 i0 40 0.489130434782609 165 88 46.8 4 818 345 176 336 DBA45660.1 MAG TPA_asm: P5662, partial [Parvovirus marine5623s3] diamond 495 111 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus marine5623s3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;