contig_metadata
49 rows where bioproject = "PRJNA927284" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1252579 | 1252579 | PRJNA927284_P_NODE_2961_length_384_cov_53.743662_g2759_i0 | PRJNA927284 | 2961 | 384 | 53.743662 | 206.37566208 | Moraxellaceae | 468 | Bacteria | Bacteria | 457 | 6.65e-124 | NTclustered | gi|1985959268|gb|CP069437.1| | 34062 | g2759 | i0 | 95.455 | 354.479166666667 | 286 | 13 | 92 | 0 | 99 | 384 | 1497704 | 1497419 | Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome | blastn | 136120 | 457 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 3452737 | 3452737 | PRJNA927284_P_NODE_3603_length_334_cov_20.645902_g3398_i0 | PRJNA927284 | 3603 | 334 | 20.645902 | 68.95731268 | uncultured Pseudomonas sp. | 114707 | Bacteria | Bacteria | 505 | 2.01e-138 | NTclustered | gi|530279740|gb|KF414181.1| | 114707 | g3398 | i0 | 94.012 | 96.0508982035928 | 334 | 18 | 100 | 2 | 1 | 334 | 9 | 340 | Uncultured Pseudomonas sp. clone 18-female3-2010 16S ribosomal RNA gene, partial sequence | blastn | 32081 | 505 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | uncultured Pseudomonas sp. | ||
| 3804601 | 3804601 | PRJNA927284_P_NODE_5003_length_257_cov_92.355263_g4796_i0 | PRJNA927284 | 5003 | 257 | 92.355263 | 237.35302591 | Acinetobacter | 469 | Bacteria | Bacteria | 442 | 1.1899999999999995e-119 | NTclustered | gi|1958425625|gb|CP068206.1| | 40214 | g4796 | i0 | 98.031 | 677.097276264591 | 254 | 5 | 99 | 0 | 4 | 257 | 3045433 | 3045180 | Acinetobacter johnsonii strain FDAARGOS_1092 chromosome, complete genome | blastn | 174014 | 442 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 3804602 | 3804602 | PRJNA927284_P_NODE_5123_length_252_cov_36.905830_g4916_i0 | PRJNA927284 | 5123 | 252 | 36.90583 | 93.0026916 | Lautropia | 47670 | Bacteria | Bacteria | 436 | 5.4e-118 | NTclustered | gi|2694691658|gb|CP146356.1| | 47671 | g4916 | i0 | 98.008 | 238.265873015873 | 251 | 5 | 99 | 0 | 1 | 251 | 1407249 | 1406999 | Lautropia mirabilis strain 512852 chromosome, complete genome | blastn | 60043 | 436 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lautropia | Lautropia mirabilis | ||
| 3804604 | 3804604 | PRJNA927284_P_NODE_6023_length_220_cov_109.109948_g5816_i0 | PRJNA927284 | 6023 | 220 | 109.109948 | 240.0418856 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 401 | 1.6799999999999993e-107 | NTclustered | gi|2890464394|gb|CP177216.1| | 562 | g5816 | i0 | 99.545 | 826.945454545455 | 220 | 1 | 100 | 0 | 1 | 220 | 226018 | 226237 | Escherichia coli strain ECDA0423 chromosome, complete genome | blastn | 181928 | 401 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3804607 | 3804607 | PRJNA927284_P_NODE_7543_length_182_cov_18.947712_g7336_i0 | PRJNA927284 | 7543 | 182 | 18.947712 | 34.48483584 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 337 | 3.82e-88 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g7336 | i0 | 100 | 664.21978021978 | 182 | 0 | 100 | 0 | 1 | 182 | 186551 | 186370 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 120888 | 337 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4730278 | 4730278 | PRJNA927284_P_NODE_2204_length_470_cov_47.714286_g2013_i0 | PRJNA927284 | 2204 | 470 | 47.714286 | 224.2571442 | Massilia putida | 1141883 | Bacteria | Bacteria | 372 | 3.09e-98 | NTclustered | gi|1130060874|gb|CP019038.1| | 1141883 | g2013 | i0 | 97.26 | 255.26170212766 | 219 | 6 | 47 | 0 | 1 | 219 | 3596293 | 3596511 | Massilia putida strain 6NM-7 chromosome, complete genome | blastn | 119973 | 372 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia putida | ||
| 6005025 | 6005025 | PRJNA927284_P_NODE_3145_length_369_cov_9.258824_g2940_i0 | PRJNA927284 | 3145 | 369 | 9.258824 | 34.16506056 | Methylobacterium tardum | 374432 | Bacteria | Bacteria | 656 | 0 | NTclustered | gi|2245106283|gb|CP097484.1| | 374432 | g2940 | i0 | 98.91 | 367.357723577236 | 367 | 4 | 99 | 0 | 1 | 367 | 434676 | 434310 | Methylobacterium tardum strain DSM 19566 chromosome, complete genome | blastn | 135555 | 656 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium tardum | ||
| 6356599 | 6356599 | PRJNA927284_P_NODE_2205_length_470_cov_47.682540_g2014_i0 | PRJNA927284 | 2205 | 470 | 47.68254 | 224.107938 | Vibrio | 662 | Bacteria | Bacteria | 841 | 0 | NTclustered | gi|2869869154|gb|CP175806.1| | 666 | g2014 | i0 | 98.936 | 911.095744680851 | 470 | 5 | 100 | 0 | 1 | 470 | 156821 | 156352 | Vibrio cholerae strain N19-2759 chromosome 1, complete sequence | blastn | 428215 | 846 | 0.994089834515366 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 6356602 | 6356602 | PRJNA927284_P_NODE_3165_length_367_cov_26.718935_g2960_i0 | PRJNA927284 | 3165 | 367 | 26.718935 | 98.05849145 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 606 | 5.929999999999997e-169 | NTclustered | gi|1539751175|emb|LR134290.1| | 300 | g2960 | i0 | 97.207 | 348.891008174387 | 358 | 10 | 98 | 0 | 10 | 367 | 4446297 | 4445940 | Pseudomonas mendocina strain NCTC10897 genome assembly, chromosome: 1 | blastn | 128043 | 612 | 0.990196078431373 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas mendocina | ||
| 6356604 | 6356604 | PRJNA927284_P_NODE_3505_length_341_cov_3.644231_g3300_i0 | PRJNA927284 | 3505 | 341 | 3.644231 | 12.42682771 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 551 | 2.609999999999999e-152 | NTclustered | gi|2659433310|gb|CP136508.1| | 592317 | g3300 | i0 | 95.894 | 50.5307917888563 | 341 | 13 | 99 | 1 | 2 | 341 | 1462391 | 1462731 | [Empedobacter] haloabium strain ATCC 31962 chromosome, complete genome | blastn | 17231 | 551 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | [Empedobacter] haloabium | |||
| 7279945 | 7279945 | PRJNA927284_P_NODE_8346_length_168_cov_1.345324_g8139_i0 | PRJNA927284 | 8346 | 168 | 1.345324 | 2.26014432 | Aeromonas veronii | 654 | Bacteria | Bacteria | 294 | 2.12e-75 | NTclustered | gi|1987851774|gb|CP070205.1| | 654 | g8139 | i0 | 98.214 | 101.011904761905 | 168 | 3 | 100 | 0 | 1 | 168 | 1288511 | 1288678 | Aeromonas veronii strain Colony604 chromosome | blastn | 16970 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas veronii | ||
| 7630678 | 7630678 | PRJNA927284_P_NODE_2186_length_474_cov_60.669663_g1996_i0 | PRJNA927284 | 2186 | 474 | 60.669663 | 287.57420262 | Aeromonas | 642 | Bacteria | Bacteria | 793 | 0 | NTclustered | gi|2050251579|gb|CP053882.1| | 650 | g1996 | i0 | 96.849 | 891.630801687764 | 476 | 11 | 100 | 3 | 1 | 474 | 2951206 | 2951679 | Aeromonas jandaei strain 3036 chromosome, complete genome | blastn | 422633 | 793 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas jandaei | ||
| 8554702 | 8554702 | PRJNA927284_P_NODE_3747_length_325_cov_18.891892_g3541_i0 | PRJNA927284 | 3747 | 325 | 18.891892 | 61.398649 | Rheinheimera sp. F8 | 1763998 | Bacteria | Bacteria | 448 | 3.3299999999999996e-121 | NTclustered | gi|975021511|gb|CP013656.1| | 1763998 | g3541 | i0 | 92.88 | 601.252307692308 | 309 | 21 | 95 | 1 | 15 | 323 | 417418 | 417111 | Rheinheimera sp. F8 genome | blastn | 195407 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Rheinheimera | Rheinheimera sp. F8 | ||
| 8554712 | 8554712 | PRJNA927284_P_NODE_5487_length_238_cov_3.157895_g5280_i0 | PRJNA927284 | 5487 | 238 | 3.157895 | 7.5157901 | Pseudoduganella armeniaca | 2072590 | Bacteria | Bacteria | 412 | 8.51e-111 | NTclustered | gi|1373149607|gb|CP028324.1| | 2072590 | g5280 | i0 | 97.908 | 7.63025210084034 | 239 | 4 | 100 | 1 | 1 | 238 | 2087023 | 2086785 | Pseudoduganella armeniaca strain ZMN-3 chromosome, complete genome | blastn | 1816 | 412 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Pseudoduganella | Pseudoduganella armeniaca | ||
| 8554734 | 8554734 | PRJNA927284_P_NODE_8907_length_158_cov_1.782946_g8700_i0 | PRJNA927284 | 8907 | 158 | 1.782946 | 2.81705468 | Vibrio ziniensis | 2711221 | Bacteria | Bacteria | 67.6 | 4.66e-7 | NTclustered | gi|1818227119|gb|CP049331.1| | 2711221 | g8700 | i0 | 93.333 | 0.284810126582278 | 45 | 3 | 28 | 0 | 3 | 47 | 789801 | 789757 | Vibrio ziniensis strain ZWAL4003 chromosome 1, complete sequence | blastn | 45 | 67.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio ziniensis | ||
| 8905357 | 8905357 | PRJNA927284_P_NODE_3567_length_337_cov_7.574675_g3362_i0 | PRJNA927284 | 3567 | 337 | 7.574675 | 25.52665475 | Bacteria | 2 | Bacteria | Bacteria | 510 | 4.37e-140 | NTclustered | gi|2118810304|gb|OK560086.1| | 479 | g3362 | i0 | 94.328 | 121.427299703264 | 335 | 15 | 99 | 4 | 1 | 333 | 6 | 338 | Moraxella sp. strain PW7_R2A100_8 16S ribosomal RNA gene, partial sequence | blastn | 40921 | 510 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. | ||
| 8905360 | 8905360 | PRJNA927284_P_NODE_5647_length_232_cov_91.655172_g5440_i0 | PRJNA927284 | 5647 | 232 | 91.655172 | 212.63999904 | Shewanella | 22 | Bacteria | Bacteria | 407 | 3.84e-109 | NTclustered | gi|470469643|ref|NR_076190.1| | 70863 | g5440 | i0 | 98.696 | 801.284482758621 | 230 | 2 | 99 | 1 | 1 | 230 | 463 | 235 | Shewanella oneidensis strain MR-1 23S ribosomal RNA gene, complete sequence | blastn | 185898 | 407 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Shewanellaceae | Shewanella | Shewanella oneidensis | ||
| 10181223 | 10181223 | PRJNA927284_P_NODE_3088_length_374_cov_21.617391_g2884_i0 | PRJNA927284 | 3088 | 374 | 21.617391 | 80.84904234 | Ralstonia | 48736 | Bacteria | Bacteria | 510 | 4.89e-140 | NTclustered | gi|1033679377|gb|CP012605.1| | 190721 | g2884 | i0 | 91.003 | 217.187165775401 | 389 | 20 | 100 | 9 | 1 | 374 | 3233291 | 3232903 | Ralstonia insidiosa strain FC1138 chromosome 1, complete sequence | blastn | 81228 | 510 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia insidiosa | ||
| 10181230 | 10181230 | PRJNA927284_P_NODE_5368_length_243_cov_4.831776_g5161_i0 | PRJNA927284 | 5368 | 243 | 4.831776 | 11.74121568 | Pseudomonadota | 1224 | Bacteria | Bacteria | 327 | 3.25e-85 | NTclustered | gi|1407714244|dbj|AP018558.1| | 297 | g5161 | i0 | 91.057 | 221.917695473251 | 246 | 16 | 100 | 3 | 1 | 243 | 220553 | 220311 | Hydrogenophilus thermoluteolus TH-1 DNA, complete genome | blastn | 53926 | 327 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Hydrogenophilia | Hydrogenophilales | Hydrogenophilaceae | Hydrogenophilus | Hydrogenophilus thermoluteolus | ||
| 11105469 | 11105469 | PRJNA927284_P_NODE_7649_length_181_cov_1.500000_g7442_i0 | PRJNA927284 | 7649 | 181 | 1.5 | 2.715 | Pseudomonas sp. SG20056 | 3074146 | Bacteria | Bacteria | 154 | 4.1e-33 | NTclustered | gi|2579573847|gb|CP134499.1| | 3074146 | g7442 | i0 | 82.222 | 1.97237569060773 | 180 | 30 | 99 | 2 | 1 | 179 | 2162245 | 2162423 | Pseudomonas sp. SG20056 chromosome, complete genome | blastn | 357 | 154 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. SG20056 | ||
| 12732010 | 12732010 | PRJNA927284_P_NODE_8930_length_157_cov_15.726562_g8723_i0 | PRJNA927284 | 8930 | 157 | 15.726562 | 24.69070234 | Acinetobacter | 469 | Bacteria | Bacteria | 278 | 1.96e-70 | NTclustered | gi|2213367804|gb|CP094246.1| | 70346 | g8723 | i0 | 98.718 | 691.12101910828 | 156 | 2 | 99 | 0 | 1 | 156 | 724122 | 724277 | Acinetobacter variabilis strain BDT2044 chromosome, complete genome | blastn | 108506 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter variabilis | ||
| 13655594 | 13655594 | PRJNA927284_P_NODE_8351_length_167_cov_13.434783_g8144_i0 | PRJNA927284 | 8351 | 167 | 13.434783 | 22.43608761 | Rheinheimera sp. F8 | 1763998 | Bacteria | Bacteria | 287 | 3.53e-73 | NTclustered | gi|975021511|gb|CP013656.1| | 1763998 | g8144 | i0 | 97.605 | 824.958083832335 | 167 | 4 | 100 | 0 | 1 | 167 | 415891 | 416057 | Rheinheimera sp. F8 genome | blastn | 137768 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Rheinheimera | Rheinheimera sp. F8 | ||
| 14006598 | 14006598 | PRJNA927284_P_NODE_3811_length_321_cov_2.342466_g3605_i0 | PRJNA927284 | 3811 | 321 | 2.342466 | 7.51931586 | Herbaspirillum | 963 | Bacteria | Bacteria | 390 | 5.62e-104 | NTclustered | gi|2204876709|gb|CP049334.1| | 964 | g3605 | i0 | 91.156 | 89.981308411215 | 294 | 17 | 90 | 5 | 8 | 295 | 357403 | 357113 | Herbaspirillum seropedicae strain Z69 chromosome | blastn | 28884 | 390 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum seropedicae | ||
| 14929809 | 14929809 | PRJNA927284_P_NODE_8072_length_172_cov_8.783217_g7865_i0 | PRJNA927284 | 8072 | 172 | 8.783217 | 15.10713324 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 167 | 4.939999999999999e-37 | NTclustered | gi|1943280950|gb|CP065751.1| | 34062 | g7865 | i0 | 94.495 | 239.546511627907 | 109 | 4 | 63 | 2 | 1 | 108 | 548370 | 548477 | Moraxella osloensis strain FDAARGOS_870 chromosome, complete genome | blastn | 41202 | 167 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 16204861 | 16204861 | PRJNA927284_P_NODE_7493_length_183_cov_3.649351_g7286_i0 | PRJNA927284 | 7493 | 183 | 3.649351 | 6.67831233 | Pseudoduganella sp. UC29_106 | 3374553 | Bacteria | Bacteria | 167 | 5.33e-37 | NTclustered | gi|2842916434|gb|CP171977.1| | 3374553 | g7286 | i0 | 90.769 | 178.27868852459 | 130 | 5 | 71 | 5 | 54 | 183 | 542185 | 542307 | Pseudoduganella sp. UC29_106 chromosome, complete genome | blastn | 32625 | 167 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Pseudoduganella | Pseudoduganella sp. UC29_106 | ||
| 16204862 | 16204862 | PRJNA927284_P_NODE_7593_length_181_cov_19.144737_g7386_i0 | PRJNA927284 | 7593 | 181 | 19.144737 | 34.65197397 | Glaciimonas sp. PAMC28666 | 2807626 | Bacteria | Bacteria | 224 | 3.08e-54 | NTclustered | gi|1992345602|gb|CP070304.1| | 2807626 | g7386 | i0 | 99.194 | 338.265193370166 | 124 | 1 | 69 | 0 | 2 | 125 | 1618465 | 1618342 | Glaciimonas sp. PAMC28666 chromosome, complete genome | blastn | 61226 | 224 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Glaciimonas | Glaciimonas sp. PAMC28666 | ||
| 16204869 | 16204869 | PRJNA927284_P_NODE_8713_length_161_cov_110.628788_g8506_i0 | PRJNA927284 | 8713 | 161 | 110.628788 | 178.11234868 | Pseudothauera hydrothermalis | 2184083 | Bacteria | Bacteria | 233 | 4.45e-57 | NTclustered | gi|1435301761|gb|CP029331.1| | 2184083 | g8506 | i0 | 94.667 | 266.385093167702 | 150 | 8 | 93 | 0 | 1 | 150 | 933723 | 933574 | Thauera hydrothermalis, complete genome | blastn | 42888 | 233 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Rhodocyclales | Zoogloeaceae | Pseudothauera | Pseudothauera hydrothermalis | ||
| 16204873 | 16204873 | PRJNA927284_P_NODE_9153_length_153_cov_2.483871_g8946_i0 | PRJNA927284 | 9153 | 153 | 2.483871 | 3.80032263 | Undibacterium cyanobacteriorum | 3073561 | Bacteria | Bacteria | 189 | 9.16e-44 | NTclustered | gi|2575695762|gb|CP133720.1| | 3073561 | g8946 | i0 | 91.852 | 36.437908496732 | 135 | 11 | 88 | 0 | 8 | 142 | 2863204 | 2863338 | Undibacterium cyanobacteriorum strain 20NA77.5 chromosome, complete genome | blastn | 5575 | 189 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium cyanobacteriorum | ||
| 16555058 | 16555058 | PRJNA927284_P_NODE_4253_length_295_cov_24.244361_g4046_i0 | PRJNA927284 | 4253 | 295 | 24.244361 | 71.52086495 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 532 | 8.02e-147 | NTclustered | gi|1885850376|gb|CP050036.1| | 562 | g4046 | i0 | 99.656 | 681.64406779661 | 291 | 1 | 99 | 0 | 1 | 291 | 1175626 | 1175336 | Escherichia coli strain 58-3 chromosome, complete genome | blastn | 201085 | 532 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 17479995 | 17479995 | PRJNA927284_P_NODE_6354_length_211_cov_1.384615_g6147_i0 | PRJNA927284 | 6354 | 211 | 1.384615 | 2.92153765 | Undibacterium | 401469 | Bacteria | Bacteria | 118 | 2.8199999999999997e-30 | NR | WP_189357611.1 | 1131567 | g6147 | i0 | 91.3 | 1.96208530805687 | 69 | 6 | 98.1 | 0 | 3 | 209 | 15 | 83 | WP_189357611.1 porin [Undibacterium squillarum] | diamond | 414 | 119 | 0.991596638655462 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium squillarum | ||
| 20028460 | 20028460 | PRJNA927284_P_NODE_2116_length_482_cov_57.995585_g1926_i0 | PRJNA927284 | 2116 | 482 | 57.995585 | 279.5387197 | Escherichia coli | 562 | Bacteria | Bacteria | 828 | 0 | NTclustered | gi|2890456135|gb|CP177214.1| | 562 | g1926 | i0 | 97.718 | 696.412863070539 | 482 | 9 | 100 | 1 | 1 | 482 | 4036515 | 4036994 | Escherichia coli strain ECDA1123 chromosome, complete genome | blastn | 335671 | 828 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20378891 | 20378891 | PRJNA927284_P_NODE_5056_length_255_cov_62.274336_g4849_i0 | PRJNA927284 | 5056 | 255 | 62.274336 | 158.7995568 | Burkholderiaceae | 119060 | Bacteria | Bacteria | 311 | 3.46e-80 | NTclustered | gi|752314807|gb|CP010536.1| | 68895 | g4849 | i0 | 89.837 | 224.776470588235 | 246 | 20 | 95 | 4 | 1 | 243 | 2147495 | 2147738 | Cupriavidus basilensis strain 4G11 chromosome main, complete sequence | blastn | 57318 | 311 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Cupriavidus basilensis | ||
| 20378892 | 20378892 | PRJNA927284_P_NODE_7956_length_175_cov_1.842466_g7749_i0 | PRJNA927284 | 7956 | 175 | 1.842466 | 3.2243155 | Undibacterium | 401469 | Bacteria | Bacteria | 195 | 2.31e-45 | NTclustered | gi|1538932687|gb|CP034464.1| | 401471 | g7749 | i0 | 90.132 | 41.4914285714286 | 152 | 12 | 86 | 3 | 25 | 175 | 3727965 | 3727816 | Undibacterium parvum strain DSM 23061 chromosome, complete genome | blastn | 7261 | 196 | 0.994897959183674 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium parvum | ||
| 20378893 | 20378893 | PRJNA927284_P_NODE_8716_length_161_cov_13.287879_g8509_i0 | PRJNA927284 | 8716 | 161 | 13.287879 | 21.39348519 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|2890447952|gb|CP177213.1| | 562 | g8509 | i0 | 100 | 932.006211180124 | 161 | 0 | 100 | 0 | 1 | 161 | 228598 | 228758 | Escherichia coli strain ECGI0223 chromosome, complete genome | blastn | 150053 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21654815 | 21654815 | PRJNA927284_P_NODE_3877_length_316_cov_464.101045_g3670_i0 | PRJNA927284 | 3877 | 316 | 464.101045 | 1466.5593022 | root | 1 | Root_unresolved | Root_unresolved | 488 | 1.8999999999999998e-133 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g3670 | i0 | 100 | 83.5443037974684 | 264 | 0 | 84 | 0 | 33 | 296 | 4382241 | 4382504 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 26400 | 488 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 22579013 | 22579013 | PRJNA927284_P_NODE_6018_length_221_cov_1.739583_g5811_i0 | PRJNA927284 | 6018 | 221 | 1.739583 | 3.84447843 | Salmonella sp. s54925 | 3159674 | Bacteria | Bacteria | 80.1 | 1.19e-17 | NR | WP_411027451.1 | 3159674 | g5811 | i0 | 93 | 1.81900452488688 | 43 | 3 | 58.4 | 0 | 89 | 217 | 4 | 46 | WP_411027451.1 MC/SLC25 family protein, partial [Salmonella sp. s54925] | diamond | 402 | 80.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella sp. s54925 | ||
| 22930325 | 22930325 | PRJNA927284_P_NODE_1638_length_565_cov_25.022388_g1468_i0 | PRJNA927284 | 1638 | 565 | 25.022388 | 141.3764922 | Burkholderiaceae | 119060 | Bacteria | Bacteria | 472 | 3.61e-128 | NTclustered | gi|2161649824|gb|CP088237.1| | 305 | g1468 | i0 | 95.608 | 106.348672566372 | 296 | 10 | 52 | 3 | 109 | 401 | 468250 | 468545 | Ralstonia solanacearum strain UW251 chromosome | blastn | 60087 | 472 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 22930326 | 22930326 | PRJNA927284_P_NODE_1778_length_540_cov_10.285714_g1602_i0 | PRJNA927284 | 1778 | 540 | 10.285714 | 55.5428556 | Acinetobacter | 469 | Bacteria | Bacteria | 507 | 9.42e-139 | NTclustered | gi|1294485755|gb|CP018260.1| | 29430 | g1602 | i0 | 83.759 | 527.411111111111 | 548 | 75 | 100 | 13 | 1 | 540 | 2655439 | 2655980 | Acinetobacter haemolyticus strain XH900, complete genome | blastn | 284802 | 507 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter haemolyticus | ||
| 23854158 | 23854158 | PRJNA927284_P_NODE_6459_length_207_cov_99.179775_g6252_i0 | PRJNA927284 | 6459 | 207 | 99.179775 | 205.30213425 | Massilia putida | 1141883 | Bacteria | Bacteria | 366 | 5.699999999999998e-97 | NTclustered | gi|1130060874|gb|CP019038.1| | 1141883 | g6252 | i0 | 99.02 | 522.086956521739 | 204 | 2 | 100 | 0 | 4 | 207 | 3596496 | 3596293 | Massilia putida strain 6NM-7 chromosome, complete genome | blastn | 108072 | 366 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia putida | ||
| 24204099 | 24204099 | PRJNA927284_P_NODE_1779_length_540_cov_9.624266_g1603_i0 | PRJNA927284 | 1779 | 540 | 9.624266 | 51.9710364 | Acinetobacter | 469 | Bacteria | Bacteria | 505 | 3.389999999999999e-138 | NTclustered | gi|1995439409|gb|CP070866.1| | 40214 | g1603 | i0 | 83.636 | 569.396296296296 | 550 | 77 | 100 | 11 | 1 | 540 | 497660 | 497114 | Acinetobacter johnsonii strain XY27 chromosome, complete genome | blastn | 307474 | 505 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 25127968 | 25127968 | PRJNA927284_P_NODE_2220_length_468_cov_5.312073_g2028_i0 | PRJNA927284 | 2220 | 468 | 5.312073 | 24.86050164 | Neisseria gonorrhoeae | 485 | Bacteria | Bacteria | 71.3 | 1.26e-7 | NTclustered | gi|2465161521|gb|CP119142.1| | 485 | g2028 | i0 | 92 | 30.8846153846154 | 50 | 4 | 11 | 0 | 143 | 192 | 533294 | 533343 | Neisseria gonorrhoeae strain 2022NG-0032 plasmid p2022NG-0032_1, complete sequence | blastn | 14454 | 71.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria gonorrhoeae | ||
| 25127991 | 25127991 | PRJNA927284_P_NODE_6560_length_204_cov_9.142857_g6353_i0 | PRJNA927284 | 6560 | 204 | 9.142857 | 18.65142828 | Salmonella enterica | 28901 | Bacteria | Bacteria | 333 | 5.679999999999999e-87 | NTclustered | gi|1539340327|emb|LR134142.1| | 1160765 | g6353 | i0 | 96.078 | 707.21568627451 | 204 | 8 | 100 | 0 | 1 | 204 | 1246178 | 1246381 | Salmonella enterica subsp. enterica serovar Sanjuan strain NCTC7406 genome assembly, chromosome: 1 | blastn | 144272 | 333 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 25127995 | 25127995 | PRJNA927284_P_NODE_6880_length_196_cov_8.676647_g6673_i0 | PRJNA927284 | 6880 | 196 | 8.6766470000000009 | 17.00622812 | Aquipseudomonas alcaligenes | 43263 | Bacteria | Bacteria | 324 | 3.25e-84 | NTclustered | gi|2797109174|gb|CP154874.1| | 43263 | g6673 | i0 | 96.429 | 506.974489795918 | 196 | 7 | 100 | 0 | 1 | 196 | 2589 | 2784 | Aquipseudomonas alcaligenes strain Med1 chromosome, complete genome | blastn | 99367 | 324 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Aquipseudomonas | Aquipseudomonas alcaligenes | ||
| 25479158 | 25479158 | PRJNA927284_P_NODE_2900_length_389_cov_12.172222_g2698_i0 | PRJNA927284 | 2900 | 389 | 12.172222 | 47.34994358 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 396 | 1.49e-105 | NTclustered | gi|2536885667|gb|CP129400.1| | 489632 | g2698 | i0 | 99.091 | 542.668380462725 | 220 | 2 | 97 | 0 | 169 | 388 | 487172 | 486953 | Ectopseudomonas chengduensis strain WD211 chromosome, complete genome | blastn | 211098 | 396 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas chengduensis | ||
| 25479165 | 25479165 | PRJNA927284_P_NODE_6420_length_208_cov_18.798883_g6213_i0 | PRJNA927284 | 6420 | 208 | 18.798883 | 39.10167664 | Pseudoduganella | 1522432 | Bacteria | Bacteria | 368 | 1.59e-97 | NTclustered | gi|2452220185|gb|CP119083.1| | 34070 | g6213 | i0 | 98.558 | 437.951923076923 | 208 | 3 | 100 | 0 | 1 | 208 | 2895028 | 2894821 | Pseudoduganella chitinolytica strain ACM 3522 chromosome, complete genome | blastn | 91094 | 368 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Pseudoduganella | Pseudoduganella chitinolytica | ||
| 30853419 | 30853419 | PRJNA927284_P_NODE_8114_length_172_cov_1.748252_g7907_i0 | PRJNA927284 | 8114 | 172 | 1.748252 | 3.00699344 | root | 1 | Root_unresolved | Root_unresolved | 80.9 | 2.08e-18 | NR | TOF73137.1 | 670 | g7907 | i0 | 69.1 | 7.67441860465116 | 55 | 17 | 95.9 | 0 | 6 | 170 | 5 | 59 | TOF73137.1 hypothetical protein CGJ15_27410, partial [Vibrio parahaemolyticus] | diamond | 1320 | 81.3 | 0.995079950799508 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio parahaemolyticus | ||
| 30941239 | 30941239 | PRJNA927284_P_NODE_2414_length_442_cov_2.329298_g2219_i0 | PRJNA927284 | 2414 | 442 | 2.329298 | 10.29549716 | unclassified Psychrobacter | 196806 | Bacteria | Bacteria | 45.1 | 0.0162 | NR | WP_192519134.1 | 196806 | g2219 | i0 | 43.5 | 0.420814479638009 | 62 | 30 | 42.1 | 2 | 393 | 208 | 67 | 123 | WP_192519134.1 MULTISPECIES: hypothetical protein [unclassified Psychrobacter] | diamond | 186 | 45.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Psychrobacter | |||
| 32781574 | 32781574 | PRJNA927284_P_NODE_8660_length_162_cov_2.729323_g8453_i0 | PRJNA927284 | 8660 | 162 | 2.729323 | 4.42150326 | root | 1 | Root_unresolved | Root_unresolved | 107 | 1.39e-25 | NR | WP_337456038.1 | 562 | g8453 | i0 | 96.3 | 674.944444444444 | 54 | 2 | 100 | 0 | 162 | 1 | 111 | 164 | WP_337456038.1 tubulin alpha chain, partial [Escherichia coli] | diamond | 109341 | 108 | 0.990740740740741 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;