RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA927284", tax_clade = "Opisthokonta" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA927284 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4730298 4730298 PRJNA927284_P_NODE_5224_length_249_cov_2.804545_g5017_i0 PRJNA927284 5224 249 2.804545 6.98331705 Conidiobolus coronatus 34488 Fungi Fungi 285 2.0399999999999997e-72   NTclustered gi|44936836|gb|AY546691.1| 34488 g5017 i0 87.55 75.0441767068273 249 27 100 3 1 249 2561 2805 Conidiobolus coronatus isolate AFTOL-ID 137 28S large subunit ribosomal RNA gene, partial sequence blastn 18686 285 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Conidiobolus Conidiobolus coronatus
20378887 20378887 PRJNA927284_P_NODE_3256_length_360_cov_3.767372_g3051_i0 PRJNA927284 3256 360 3.767372 13.5625392 Thamnocephalis sphaerospora 78915 Fungi Fungi 78.2 1.85e-16   NR RKP07655.1 78915 g3051 i0 70.3 1.05833333333333 64 18 52.5 1 296 108 1 64 RKP07655.1 translation machinery associated TMA7 [Thamnocephalis sphaerospora] diamond 381 78.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Sigmoideomycetaceae Thamnocephalis Thamnocephalis sphaerospora
29652616 29652616 PRJNA927284_P_NODE_4290_length_294_cov_1.339623_g4083_i0 PRJNA927284 4290 294 1.339623 3.93849162 Smittium 4888 Fungi Fungi 95.5 1.97e-22   NR OLY82642.1 133383 g4083 i0 47.4 2.96938775510204 97 51 99 0 3 293 52 148 OLY82642.1 60S ribosomal protein L12 [Smittium mucronatum] diamond 873 95.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium mucronatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;