RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA924320", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Promethearchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA924320 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27688547 27688547 PRJNA924320_S_NODE_4264_length_456_cov_2.184275_g4123_i0 PRJNA924320 4264 456 2.184275 9.960294 Promethearchaeota archaeon 2053489 Archaea Archaea 57.8 1.62e-6   NR MCK4687431.1 2053489 g4123 i0 55.8 1.77631578947368 43 19 28.3 0 130 2 3 45 MCK4687431.1 ABC transporter ATP-binding protein [Promethearchaeota archaeon] diamond 810 57.8 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
28098515 28098515 PRJNA924320_S_NODE_40065_length_177_cov_1.445312_g39923_i0 PRJNA924320 40065 177 1.445312 2.55820224 Promethearchaeota archaeon 2053489 Archaea Archaea 41.6 0.0397   NR MBY9015373.1 2053489 g39923 i0 52.5 0.677966101694915 40 19 67.8 0 176 57 947 986 MBY9015373.1 hypothetical protein [Promethearchaeota archaeon] diamond 120 41.6 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
32750244 32750244 PRJNA924320_S_NODE_57760_length_161_cov_0.910714_g57618_i0 PRJNA924320 57760 161 0.910714 1.46624954 Promethearchaeati 1935183 Archaea Archaea 42.7 0.0091   NR MBD3408344.1 2053489 g57618 i0 48.9 1.67701863354037 45 23 83.9 0 151 17 5 49 MBD3408344.1 GTP-binding protein [Promethearchaeota archaeon] diamond 270 42.7 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;